RHESUS-VYMX2EEC6
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 297 nt |
| Protein UID i | RHESUS-VP-UQ2Y5J (shared by alleles with the same V-REGION amino-acid sequence) |
Allele names i
Every name below denotes this exact sequence (RHESUS-VYMX2EEC6). None is canonical; they are labels, and the UID is the key.
Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGLV2S8*01, IGLV2-3NOK*01_t57c. These are identical normalized nucleotide sequences with different attributed names.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV2-3NOK*08 | IgLabel | OGRDB |
| IGLV2S8*01 | IMGT | IMGT |
| IGLV2-3NOK*01_t57c | VDJbase | MUSA |
Other names & identifiers
Alternative and former names, e.g. IMGT clone names, plus accession identifiers.
| Name | Kind | Source(s) |
|---|---|---|
| AM055983.1 | NCBI accession | ncbi_nucleotide |
External records i
NCBI nucleotide: link GenBank: GENBANK:AM055983 GenBank: GENBANK:AM055983.1 IMGT: IGLV2S8*01 OGRDB: IGLV2-3NOK*08
Literature references i
PubMed publications linked to this allele.
| PMID | Title | Evidence | Source |
|---|---|---|---|
| 16189671 | verified | ncbi_nucleotide |
Contributed by IMGT, MUSA, OGRDB, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAGTGGTCCAAGTTCATGGGGAACTGAGACCAAAACC | MUSA | RHESUS-RUYNCC |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGGCCTGGACTCTGCTCCTCGTCACCCTCCTCACTTAGGGCACAGGTGATCCTGGGCT | 48 + 11 nt | MUSA | RHESUS-LMHS7M |
| ACCCTCCTCACTTAGGGCACAGGATCCTGGGCT | 22 + 11 nt | IMGT | RHESUS-LZZPJA |
Find similar alleles
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VYMX2EEC6/similar?min_identity=0.95&kind=nt.
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Published by the source, and consistent with the nucleotide sequence above. i
API: JSON · AIRR AlleleDescription · aliases