AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-VYODHSFK6

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGK TypeV FunctionalFalse Length272 nt

IGKV2-23*02: a Macaca mulatta IGK V allele sequence, 272 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGK / V
Functional iFalse
Length272 nt
Protein UID iRHESUS-VP-77IOPO (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

272 nt
TTGCCCATCACCCCTAGTGAGCCGGCCTCCATCTCCTACAGGTCCAGTCACAGCCCCCTTCACAGTAATGGATGCACCTATTTGAATTGGGACCTACAGAAGCCAGGCTAACCTCCATGGCTCCCGATTTATTTGATTTCCAACCAGGACCCAGGAGTCCTGGATAGGTTCAGTGGCAGTGGGTCAGTGGCAGATTTCATGCTTAAAATCAGTACGGTGGATGCAGAGGATGTTGGGGTTTATTACTGCCAGCAAAGTACACATTATTCTCC

Amino-acid sequence (V-REGION)

90 aa
LPITPSEPASISYRSSHSPLHSNGCTYLNWDLQKPG*PPWLPIYLISNQDPGVLDRFSGSGSVADFMLKISTVDAEDVGVYYCQQSTHYS

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-VYODHSFK6). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGKV2-23*02 IgLabel MUSA
IGKV2-23*02 IMGT IMGT

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

NameKindSource(s)
NW_001099007.1 NCBI accession ncbi_nucleotide

External records i

NCBI nucleotide: link NCBI Gene: NCBIGENE:701244 GenBank: GENBANK:NW_001099007 IMGT: IGKV2-23*02

Contributed by IMGT, MUSA, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAATGGGACAGTCCTGAACACAAACC IMGT RHESUS-RYTI35

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VYODHSFK6/similar?min_identity=0.95&kind=nt.