AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RHESUS-VZ3SOP3I2

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

StatusArchived · seen 2013-01-20 → 2020-01-31 SpeciesMacaca mulatta LocusTRB TypeV FunctionalNone Length214 nt RecordSuperseded

a Macaca mulatta TRB V allele sequence, 214 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

A newer source record exists for this allele designation. TRBV7-2*01 is still published by IMGT as RHESUS-VLADPWSA5, 289 nt, which contains this sequence. This is the earlier record (214 nt, current in IMGT releases 2013-01-20–2020-01-31). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeTRB / V
Functional iNone
Length214 nt
Protein UID iRHESUS-VP-FDZ2WJ (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

214 nt
TTTCAGGTCATACCGCCCTTTATTGGTACCGACAGAGCCTGGGGAAGGGCCTGGAGTTTTTAATTTACTTCCAAGGCAACGATGCACCAGACAAATCAGGGCTGCCCAGTGGTCGGTTCTCTGCAGAGAGGACTGAGGGATCCGTCTCCACTCTGAAGATCCAGCGCACAGAGCAGGGGGACTCGGCCGTGTATCTCTGTGCCAGCAGCTTAGC

Amino-acid sequence (V-REGION)

70 aa
SGHTALYWYRQSLGKGLEFLIYFQGNDAPDKSGLPSGRFSAERTEGSVSTLKIQRTEQGDSAVYLCASSL

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: first seen IMGT 2013-01-20; formerly TRBV7-2*01 (to 2013-01-20); superseded by TRBV7-2*01 (289 nt); archived — removed from the current IMGT reference, kept reachable;

Allele names i

None.

Former IMGT names i

Former nameLast seen in IMGT release
TRBV7-2*012013-01-20

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VZ3SOP3I2/similar?min_identity=0.95&kind=nt.