RHESUS-VZQULJD54

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGL TypeV FunctionalTrue Length312 nt

Species	Macaca mulatta (NCBITAXON:9544)
Locus / type	IGL / V
Functional i	True
Length	312 nt
Protein UID i	RHESUS-VP-2RJSD2 (shared by alleles with the same V-REGION amino-acid sequence)

Allele names i

Every name below denotes this exact sequence (RHESUS-VZQULJD54). None is canonical; they are labels, and the UID is the key.

Multiple allele designations. This one sequence is recorded under 2 different allele designations: IGLV5-5FUK*02_c216t_c248t, IGLV5-ABT*01_S7811. These are identical normalized nucleotide sequences with different attributed names.

Name	Scheme	Source(s)
IGLV5-5FUK*03	IgLabel	OGRDB
IGLV5-5FUK*02_c216t_c248t	VDJbase	MUSA
IGLV5-ABT*01_S7811	VRC	VRC

External records i

OGRDB: IGLV5-5FUK*03

Contributed by MUSA, OGRDB, VRC. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGACACTCACTGATGGGGAAGTGAGACAAAAACC	MUSA	RHESUS-RD3ZJ5

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGCCTGGACTCCTCTCCTCCTCCTGCTCCTCTCTCACTGCACAGGTGTTCCCTCTCA	48 + 11 nt	MUSA	RHESUS-LHJACA

Find similar alleles

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-VZQULJD54/similar?min_identity=0.95&kind=nt.

Coding sequence (nt)

312 nt

CAGCCTGTGCTGACTCAGCCAACCTCCCTCTCAGCATCTCCTGGAGCATCAGTCAGACTCACCTGCACCTTGCGCAGTGGCATCAGTGTTGGTGGCTACAATATACACTGGTACCAGCAGAAGCCAGGGAGTCCTCCCCGGTACCTACTGTACTACTACTCAGACTCAAATAAGGGCCAGGGCTCTGGAGTTCCCAGCCGCTTCTCTGGATCCAAAGATGCTTTGGCCAATGCAGGGATTTTACTCATCTCTGGGTTCCAGTCTGAGGATGAGGCTGACTATTACTGTACGACTTGGCACAACAATGCTTCT

Amino-acid sequence (V-REGION)

104 aa

QPVLTQPTSLSASPGASVRLTCTLRSGISVGGYNIHWYQQKPGSPPRYLLYYYSDSNKGQGSGVPSRFSGSKDALANAGILLISGFQSEDEADYYCTTWHNNAS

Translated here from the nucleotide sequence; no source published a protein for this allele. i

API: JSON · AIRR AlleleDescription · aliases