AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

SALMON-V7CJYBFYX

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesSalmo salar LocusIGH TypeV FunctionalNone Length301 nt

IGHV14-51*01: a Salmo salar IGH V allele sequence, 301 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesSalmo salar (NCBITAXON:8030)
Locus / typeIGH / V
Functional iNone
Length301 nt
Protein UID iSALMON-VP-4CWT74 (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

301 nt
AGTGTTTAACACAACCAGCCAAACTCATTGAGTGTAAAGCCTGGAGAAACTTTGACTATCAGTTGTGCGATCTCTGGGTATTCTCTTACAGACAACAGCTATGCGGTAGCCTGGATCCGACAGCCTTTAGGGAAACCAATGGAATGTATTTTTTATATTTGGGGTGGTGGTACTTTTTACCTTAACAATGCACTAAAAAACAAGTTCAGCTTTAGAAGAGACATGTCCAGCAGTACTTCAATTATAACAGGACAGAACCTGCAGATTGAAGACACAGCTGTGTATTATTGTGCTCGACAAC

Amino-acid sequence (V-REGION)

100 aa
SV*HNQPNSLSVKPGETLTISCAISGYSLTDNSYAVAWIRQPLGKPMECIFYIWGGGTFYLNNALKNKFSFRRDMSSSTSIITGQNLQIEDTAVYYCARQ

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (SALMON-V7CJYBFYX). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGHV14-51*01 IMGT IMGT

External records i

IMGT: IGHV14-51*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGATACAAACCAACACAGGACCTGTACAAAAAAC IMGT SALMON-RZBGLV

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/SALMON-V7CJYBFYX/similar?min_identity=0.95&kind=nt.