AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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SHEEP-VLB2WHLLF

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesOvis aries LocusIGL TypeV FunctionalTrue Length317 nt

IGLV5-84*01: a Ovis aries IGL V allele sequence, 317 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesOvis aries (NCBITAXON:9940)
Locus / typeIGL / V
Functional iTrue
Length317 nt
Protein UID iSHEEP-VP-DDFXTT (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

317 nt
CAGCCTCTTCTGACTCAGCCGGCCTCCCTCTCTGCGTCTCCGGGAGCATCAGCCAGACTCTCCTGCACCCTGAGCAGTGGCTACAATGTTGGCAACTATAGCATATACTGGTATCAGCAGAAGGCAGGGAGCCCTCCCCGGTACCTCCTGAGGTTCAAGTCAGACTCTGATAAGCACCAGGGCTCTGGGGTTCCCAACCGCTTCTCTGGATCCAAAGATGCCTCGACCAACGCAGGGCTCCTGCTCATCTCCGAGGTGCAGCCCGAGGACGAGGCCGACTATTACTGTGCTGTGTGGCATGACGACACTAATGCTCA

Amino-acid sequence (V-REGION)

105 aa
QPLLTQPASLSASPGASARLSCTLSSGYNVGNYSIYWYQQKAGSPPRYLLRFKSDSDKHQGSGVPNRFSGSKDASTNAGLLLISEVQPEDEADYYCAVWHDDTNA

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (SHEEP-VLB2WHLLF). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV5-84*01 IMGT IMGT

External records i

IMGT: IGLV5-84*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACGGTGCTCCAGAGCAGTGAGGAAGAGCAACAGAAACA IMGT SHEEP-R3OQZT

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGCCTGGACTCCTCTCCTGCTGGTGCTCCTCTCTCTCTGCACAGGTTCCCTCTCC 46 + 11 nt IMGT SHEEP-LATKNJ

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/SHEEP-VLB2WHLLF/similar?min_identity=0.95&kind=nt.