AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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SHEEP-VOINFXMKX

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesOvis aries LocusIGL TypeV FunctionalTrue Length299 nt

IGLV1-82*01: a Ovis aries IGL V allele sequence, 299 nt, functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesOvis aries (NCBITAXON:9940)
Locus / typeIGL / V
Functional iTrue
Length299 nt
Protein UID iSHEEP-VP-HLDRWN (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

299 nt
CAGGCCGTGCTGACTCAGCCACCCTCCGTGTCCGGGTCCCCGGGCCAGAGGGTATCCATCACCTGCTCTGGAAGCAGCAGCAACATCGGGGGTGGTAATTATGTGAGCTGGTTCCAACAGCTCCCAGGATCGGCCCCCAAACTCCTCATCTATGGTACTAGCAGTCGAGAGTCAGGGGTCCCAGACCGATTCTCTGGCTCCAGGTCTGGCAACACGGCCACCCTGACCATCAGCTCGCTCCAGGCTGAGGACGAGGCCGATTATTACTGTGCAACTTATGAAAGCAGTAGTTATAATGG

Amino-acid sequence (V-REGION)

99 aa
QAVLTQPPSVSGSPGQRVSITCSGSSSNIGGGNYVSWFQQLPGSAPKLLIYGTSSRESGVPDRFSGSRSGNTATLTISSLQAEDEADYYCATYESSSYN

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (SHEEP-VOINFXMKX). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV1-82*01 IMGT IMGT

External records i

IMGT: IGLV1-82*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGCTCCAGGCCAGGGGGGAAGTGAGACAAAAACC IMGT SHEEP-RWMUFG

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)SplitSourceLeader UID
ATGGCCTGGTCCCCTCTGCTCCTCACCCTGGTCACTCTCTGCACAGGATCCTGGGCC 46 + 11 nt IMGT SHEEP-L7E6XT

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/SHEEP-VOINFXMKX/similar?min_identity=0.95&kind=nt.