TROUT-CES5XQ5CA
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHM*05: a Oncorhynchus mykiss IGH C allele sequence, 942 nt, not recorded. The nucleotide sequence is below, with every recorded name and its source.
| Species | Oncorhynchus mykiss (NCBITAXON:8022) |
|---|---|
| Locus / type | IGH / C |
| Functional i | None |
| Length | 942 nt |
Coding sequence (nt)
IMGT publishes this constant region as separate domain records, not as one sequence. What is shown here is those domains concatenated in domain order: CH1:297 + CH2:342 + CH3:303, which is the secreted form. The membrane-bound form uses different 3' exons and is a separate transcript, not represented here.
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (TROUT-CES5XQ5CA). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHM*05 | IMGT | IMGT |
External records i
IMGT: IGHM*05
Contributed by IMGT. See Sources & citations for each source's version, citation and licence.
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/TROUT-CES5XQ5CA/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases