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TROUT-VYWY75QO2

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesOncorhynchus mykiss LocusIGH TypeV FunctionalNone Length304 nt

IGHV16-39-4*01: a Oncorhynchus mykiss IGH V allele sequence, 304 nt, not recorded. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesOncorhynchus mykiss (NCBITAXON:8022)
Locus / typeIGH / V
Functional iNone
Length304 nt
Protein UID iTROUT-VP-KVLSSE (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

304 nt
AGTCAGAGTCTGGAGGCCATTCCCTCCAGTCCAGTCTTGAAAAAGCCTGCAGAACCTCTCAGCCTCTCCTGTAAGGGATCTGGCTTTACCTTTAGTAGCTACAACATGGCCTGGATACGTCAACCTGAAGGAAGAGCACTTGAATGGATAGGCATTATATGAAGTGATGCTGGTGGAACTGTATATACAAAAAGTGTTGAAGGACGGATAGAAGTCACAAGAGACAATTCTAACAGCATGGTGTATCTGAAGCTGTCTGGTCTGAGAGCAGAGGACTCTGCTGTGTATTACTATGCAAAAGAGA

Amino-acid sequence (V-REGION)

101 aa
SQSLEAIPSSPVLKKPAEPLSLSCKGSGFTFSSYNMAWIRQPEGRALEWIGII*SDAGGTVYTKSVEGRIEVTRDNSNSMVYLKLSGLRAEDSAVYYYAKE

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (TROUT-VYWY75QO2). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGHV16-39-4*01 IMGT IMGT

External records i

IMGT: IGHV16-39-4*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/TROUT-VYWY75QO2/similar?min_identity=0.95&kind=nt.