ZEBRAFISH-C6EOONHTY

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesDanio rerio LocusIGH TypeC FunctionalNone Length4485 nt

IGHD*01: a Danio rerio IGH C allele sequence, 4485 nt, not recorded. The nucleotide sequence is below, with every recorded name and its source.

Species	Danio rerio (NCBITAXON:7955)
Locus / type	IGH / C
Functional i	None
Length	4485 nt · contains ambiguity

Coding sequence (nt)

IMGT publishes this constant region as separate domain records, not as one sequence. What is shown here is those domains concatenated in domain order: CH1:282 + CH2D:291 + CH2D2:291 + CH2D3:291 + CH3:312 + CH3D:312 + CH3D2:312 + CH3D3:312 + CH4:291 + CH4D:291 + CH4D2:291 + CH4D3:291 + CH5:315 + CH6:315 + CH7:288, which is the secreted form. The membrane-bound form uses different 3' exons and is a separate transcript, not represented here.

4485 nt c_secreted

RTCACTAAGCCCAGAATAGCTCTGCTGAGTAGAGAGGATGGTGATAGAATCATGTTGGAGTGCCACTTGAAAGATTACTATCCAGAGGAATTTAGTGTACAATGGCTTTATAATGGTCAGCCTGTCAGCGGTACAAACAGAATGCTGCAGAACAAAGAAGTGGAGAAAACTTTTACCTACATAAGTCAACTGAATATTAGTTATTCACATGATTACAAGAATTACACTTGTTATGCCAACCACAACTCTAAGGTATACCAGCAAGACTATAACAGGTGCACTGCACATTGTTTCATCAAACCTTCAATCCAAATAAAGACAAACCCTCTCAGAGACATTATAAAAACGGGCAATGTCACATTGTCATGTGTTGTTAAAGCTCCAGACATCACTATAGTGTCATGGTTGGTAGATGGTCAAAGTGAACCAACCACCACACCACACAAAGATCTCTCCAATAACACTGTGAGCTACTTGACTGTGAGCACAAAGGATTGGTTGAAGAAAACCATTGTTTGTATTGCTCAACATCCTTGTTTCTCAAACGAGAGTCGTGAAAATCAGGCTGGTAAGGCACATTGTTTCATCAAACCTTCAATCCAAATAAAGACAAACCCTCTCAGAGACATTATAAAAACGGGCAATGTCACATTGTCATGTGTTGTTAAAGCTCCAGACATCACTATAGTGTCATGGTTGGTAGATGGTCAAAGTGAACCAACCACCACACCACACAAAGATCTCTCCAATAACACTGTGAGCTACTTGACTGTGAGCACAAAGGATTGGTTAAAGAAAACCATTGTTTGTTTTGCTCAACATCCTTGTTTCTCAAACGAGAGTCGTGAAAATCAGGCTGGTAAGGCACATTGTTTGATCAAACCTTCAATCCAAATAAAGACAAACCCTCTCAAAGACATTATAAAAACGGGCAATGTCACATTGTCATGTGTTGTTAAAGCTCCAGAGTACACTGTAGTGTCATGGTTGGTAGATGGTCAAAGTGAACCAACCACCACACCACACAAAGATCTCTCCAATAACACTGTGAGCTACTTGACTGTGAGCACAAAGGATTGGTTAAAGAAAACCATTGTTTGTTTTGCTCAACATCCTTGTTTCTCAAACGAGAGTCATGAAAATCAGGCTGGTAAGAAAGACGTAAAGAAGGATCCTGAAGTGGAGATCAGGAGGTCTTTCATGAAATCATCAGCACCAGTAAGTGATGCTGTGCTGGAGTGTGTTGTGGGTGATCTTTCTCCTGGCGAGGTCTGCATCACTTTCCAGGCTAATAATGTTGATATCTCAGATCTCGATTGTGTGGATTCAGCCCCTTCTAATAACAGTTGGTCCTTGATTAGAAATTTTACAATACCCAGTTCAAATCAGACGACAGAAAATAACTTTACCTGTAAAGTTCATAGTGCCTTTAAAGAATGGACATCAAAACCTACTGGACACATTTTTAAAGACGTAAAGAAGGATCCTGAAGTGGAGATCAGGAGGTCTTTCATGAAATCATCAGCACCAGTAAGTGATGCTGTGCTGGAGTGTGTTGTGGGTGATCTTTCTCCTGGCGAGGTCTGCATCACTTTCCAGGCTAATAATGTTGATATCTCAGATCTCGATTGTGTGGATTCAGCCCCTTCTAATAACAGTTGGTCCTTGATTAGAAATTTTACAATACCCAGTTCAAATCAGACGACAGAAAATAACTTTACCTGTAAAGTTCATCGTGCCTTTAAAGAATGGACATCAAAACCTACTGGACACATTTTTAAAGACGTAAAGAAGGATCCTGAAGTGGAGATCAGGAGGTCTTTCATGAAATCATCAGCACCAGTAAGTGATGCTGTGCTGGAGTGTGTTGTGGGTGATCTTTCTCCTGGCGAGGTCTGCATCACTTTCCAGGCTAATAATGTTGATATCTCAGATCTCGATTGTGTGGATTCAGCCCCTTCTAATAACAGTTGGTCCTTGATTAGAAATTTTACAATACCCAGTTCAAATCAGACGACAGAAAATAACTTTACCTGTAAAGTTCATCGTGCCTTTAAAGAATGGACATCAAAACCTACTGGACACATTTTTAAAAACGTAAAGAAGGATCCTGAAGTGGAGATCAGGAGGTCTTTCATGAAATCATCAGCACCAGTAGGTGGTGCTGTGCTGGAGTGTGTTGTGGGTGATCTTTCTCCTGGTGAGGTCTGCATCACTTTCCAGGCTAATAATGTTGATATCTCAGATCTCGATTGTGTGGATTCAGCCCCTTCTAATAACAGTTGGTCCTTGATTAGAAATTTTACAATACCCAGTTCAAATCAGACGACAGAAAATAACTTTACCTGTAAAGTTCATAGTGCCTTTAAAGAATGGACATCAAAACCTACTGGACACATTTTTGATAATGCTTCCTCGGAGCTTGTTGTTGGTCCTAAAGTGGTTCAGTCTAGTTCAGAGTACCAAAAGCTGCTGTGCTCTGCTACAGGGTTTTATCCCAAGATAGAGTGGCTTCCACAATCTAGTGTAAAAGCTAGCAACTCAACCATCACCCTGATGCAAGATGGCCACGTGAAAGTGTACAGTGAGATATTAGTGCCCCAGGATGAGTGGAATAAAGGAGTCAATTTCACCTGCCTAGTTACAGATGGGACCAATAAAGAAACTGTTGAGAAAAACACCAGTATTTGTTCAGATAATGCTTCCTCAGAGCTTGTTGTTGGTCCTAAAGTGGTTCAGTCTAGTTCAGAGTACCAGAAGCTGCTGTGCTCTGCTACAGGGTTTTATCCCAAGATACAGTGGCTTCCACAATCTAGTGTAAAAGCTAGCAACTCAACCGTCACCCTGATGCAAGATGGCCACGTGAAAGTGTACAGTGAGATATTAGTGCCCCAGGATGAGTGGAATAAAGGAGTCAATTACACCTGCCTAGTTACAGATGGGACCAATAAAGAAACTGTTGAGAAAAACACCAGTATTTGTTCAGATAATGCTTCCTCAGAGCTTGTTGTTGGTCCTAAAGTGGTTCAGTCTAGTTCAGAGTACCAGAAGCTGCTGTGCTCTGCTACAGGGTTTTATCCCAAGATACAGTGGCTTCCACAATCTAGTGTAAAAGCTAGCAACTCAACCGTCACCCTGATGCAAGATGGCCACGTGAAAGTGTACAGTGAGATATTAGTGCCCCAGGATGAGTGGAATAAAGGAGTCAATTACACCTGCCTAGTTACAGATGGGACCAATAAAGAAACTGTTGAGAAAAACACCAGTATTTGTTCAGATAATGCTTCCTCAGAGCTTGTTGTTGGTCCTAAAGTGGTTCAGTCTAGTTCAGAGTACCAGAAGCTGCTGTGCTCTGCTACAGGGTTTTATCCCAAGATACAGTGGCTTCCACAATCTAGTGTAAAAGCTAGCAACTCAACCGTCACCCTGATGCAAGATGGCCACGTGAAAGTGTACAGTGAGATATTAGTGCCCCAGGATGAGTGGAATAAAGGAGTCAATTACACCTGCCTAGTTACAGATGGGACCAATAGAGAACCTGTTGAGAAAAACACCAGTATTTGTTCAGTCATTGCACCATCCAGTCAGCAGGCAGACGTCTTCTTGCTGGGTCCTCCCCTCAGTTTTGCAAGCTCTGACTTAAATTTGACCTGTATAGTTATTGGTCAGAATGTTGAGTATTTCATCTTTCAGTGGAAAGTGAATGGAAATAATAGTGATGGTATTGATCAAGCTCCAGTACAGCATCTTAACGGGACTCAAAGCAAAGTAAATCTATTGAAAGTTTCAGTTAATACATGGAATTCACATGCCCTCATCACCTGCGAGGTCAAGCATTTGTGCTCCGTAGACACACAAAAGCAGAGAATCTTAAAAACCAGAGACCCAAAACAGCCCACTGTGAGAATCCTCAGACCCTCAGACAGTGATCTCTCTGGAGGCAAAATTTCCAGCCTTGTTTGCTTTATCAGTGATTTCTTCCCTTCTGATATCTTAGTAGAGTGGAAGCTAAATGGAAAGCAGCTTAGCAGGTCTCAGTTTTCTAACAGCCCTCTGGTTGCACTCTCTTCAGGAGGTTTTTCAATGCATAGTGCTCTAATTTTACCTGGAGAGCAGCAAAAGGATGGCATCTACTCTTGTGAAGTTTCTCATGAGTCTTCCCAAAAACCAATCAATGCCACTTTGGAGAACTTGTATGCATCCTTGCACCATTCTGCTCCATCTGCAGAGCTGCTACAGGGTGCTGATGGGCTAATGTGTCTGGTGTCGGGTTTTAGTCCATCTTCCATCAATATAACTTGGTTTATGGGAATGACTGAAATGTCTGAGCAGAACAAGACCAAACTTGCAAAATACCCTGATGGAAAATTTCTAATCCAAAGTCACCTGCCTCTCAAGCCTTCAGATTGGGCTCCTGGTGAGGTGTACACATGCAGGGTCACTCATGTTACTGGCACTCAGTGGTTTAACATCTCGAAAAATTCA

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (ZEBRAFISH-C6EOONHTY). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
IGHD*01	IMGT	IMGT

External records i

IMGT: IGHD*01

Contributed by IMGT. See Sources & citations for each source's version, citation and licence.

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/ZEBRAFISH-C6EOONHTY/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases