AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS COW-RKD7B5

SpeciesCOW
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGGGGAAGTCAGTGTGAGCCCAG spacer · 23 nt ACAAAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACAAAAACC

Find similar RSS

Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-10*01 COW IGH IMGT COW-VWBX2A3G5
IGHV1-14*01 COW IGH IMGT COW-VGUX5VYUD
IGHV1-14*02 COW IGH IMGT COW-VJLT2A2T2
IGHV1-32*01 COW IGH IMGT COW-V6GVC4YOF
IGHV1-32*02 COW IGH IMGT COW-VYPHBUVSJ
IGHV1-37*01 COW IGH IMGT COW-VY42SWAXB
IGHV1-39*01 COW IGH IMGT COW-VBPJZD5JO