AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-R2EP6Z

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt AGGGGAGGCCATTGTGCGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAGGCCATTGTGCGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

22 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-53*02 HUMAN IGH HUSA IMGT HUMAN-VQUHUQVN3
IGHV3-66*01 HUMAN IGH HUSA IMGT HUMAN-VSOJ3JHCH
IGHV3-66*02 HUMAN IGH HUSA IMGT HUMAN-VR4KXPMTP
IGHV3-66*03 HUMAN IGH HUSA IMGT HUMAN-VL7GM2HB5
IGHV3-66*04 HUMAN IGH IMGT HUMAN-VYSA7SFER
IGHV3-66*05 HUMAN IGH HUSA IMGT HUMAN-VA6NY6KUT
IGHV3-30-3*01 HUMAN IGH HUSA HUMAN-VGCTDGD2I
IGHV3-66*02_S8583 HUMAN IGH HUSA HUMAN-VAPIHHR7H
IGHV3-66*02_S9914 HUMAN IGH HUSA HUMAN-VL23IOZAX
IGHV3-66*02_S3009 HUMAN IGH HUSA HUMAN-V7TZC7VIQ
IGHV3-53*02_S3204 HUMAN IGH HUSA HUMAN-VCW3ELENN
IGHV3-53*02_S4551 HUMAN IGH HUSA HUMAN-VJI5NXIEC
IGHV3-53*02_S3046 HUMAN IGH HUSA HUMAN-VQ7MORCXC
IGHV3-66*01_S4464 HUMAN IGH HUSA HUMAN-VAI57TCMW
IGHV3-66*01_S3549 HUMAN IGH HUSA HUMAN-VDPXCXORD
IGHV3-66*01_S1222 HUMAN IGH HUSA HUMAN-VJNDBISH2
IGHV3-66*01_S3408 HUMAN IGH HUSA HUMAN-V3VIHWSMY
IGHV3-53*04 HUMAN IGH HUSA HUMAN-VAWPWFEAU
IGHV3-53*05_S8501 HUMAN IGH HUSA HUMAN-V5HAGTVG3
IGHV3-CVJX*33 HUMAN IGH HUSA HUMAN-VDJH4JA7P
IGHV3-CVJX*34 HUMAN IGH HUSA HUMAN-VA447EA76
IGHV3-66*03_S2497 HUMAN IGH HUSA HUMAN-V4DY4NJWG