AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RI4XC5

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt TTACACACCCGA spacer · 12 nt ACATAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGTTACACACCCGAACATAAACC

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Alleles with this RSS variant

8 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV1-17*01 HUMAN IGK IMGT HUMAN-VPNAAVGTV
IGKV1-17*03 HUMAN IGK IMGT HUMAN-VACLUDJCT
IGKV1-5*01 HUMAN IGK IMGT HUMAN-VOT4SN6TS
IGKV1-5*02 HUMAN IGK IMGT HUMAN-VINSGS7UX
IGKV1-5*03 HUMAN IGK IMGT HUMAN-VCZREQQLM
IGKV1-5*04 HUMAN IGK IMGT HUMAN-VWWOZMMLI
IGKV1-5*05 HUMAN IGK IMGT HUMAN-VD2HUOV3H
IGKV1D-17*01 HUMAN IGK IMGT HUMAN-VXFQBPRYL