AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RI4XC5

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (28 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt TTACACACCCGA spacer · 12 nt ACATAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGTTACACACCCGAACATAAACC

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Alleles with this RSS variant

28 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV1-17*01 HUMAN IGK HUSA IMGT HUMAN-VPNAAVGTV
IGKV1-17*03 HUMAN IGK HUSA IMGT HUMAN-VACLUDJCT
IGKV1-5*01 HUMAN IGK HUSA IMGT HUMAN-VOT4SN6TS
IGKV1-5*02 HUMAN IGK IMGT HUMAN-VINSGS7UX
IGKV1-5*03 HUMAN IGK HUSA IMGT HUMAN-VCZREQQLM
IGKV1-5*04 HUMAN IGK HUSA IMGT HUMAN-VWWOZMMLI
IGKV1-5*05 HUMAN IGK HUSA IMGT HUMAN-VD2HUOV3H
IGKV1D-17*01 HUMAN IGK HUSA IMGT HUMAN-VXFQBPRYL
IGKV1-3Y5S*03 HUMAN IGK HUSA HUMAN-VNVBDOT72
IGKV1-3Y5S*04 HUMAN IGK HUSA HUMAN-VBSCQTWWM
IGKV1-3Y5S*06 HUMAN IGK HUSA HUMAN-VG3HC6IT3
IGKV1-3Y5S*08 HUMAN IGK HUSA HUMAN-VTFYLSQXR
IGKV1-3Y5S*09 HUMAN IGK HUSA HUMAN-V3M6SWQXR
IGKV1-3Y5S*10 HUMAN IGK HUSA HUMAN-VTEWNNYQ3
IGKV1-3Y5S*11 HUMAN IGK HUSA HUMAN-VX2N3WS5M
IGKV1-65SI*02 HUMAN IGK HUSA HUMAN-VDLGNRMDI
IGKV1-65SI*03 HUMAN IGK HUSA HUMAN-V5TC3RSGE
IGKV1-65SI*04 HUMAN IGK HUSA HUMAN-VTIGX75EG
IGKV1-65SI*05 HUMAN IGK HUSA HUMAN-V5NLN3TZ3
IGKV1-65SI*06 HUMAN IGK HUSA HUMAN-VOERYR2GH
IGKV1-65SI*07 HUMAN IGK HUSA HUMAN-VUYYCOJV2
IGKV1-65SI*08 HUMAN IGK HUSA HUMAN-VTRDDRNUY
IGKV1-65SI*10 HUMAN IGK HUSA HUMAN-VAIZ4M32T
IGKV1-65SI*11 HUMAN IGK HUSA HUMAN-V4SJEK6MT
IGKV1-L65H*08 HUMAN IGK HUSA HUMAN-VDEIXU3N3
IGKV1-L65H*09 HUMAN IGK HUSA HUMAN-VS744GUDW
IGKV1-L65H*10 HUMAN IGK HUSA HUMAN-VA33RKOUE
IGKV1-MK7N*01 HUMAN IGK HUSA HUMAN-V3SCXOHQR