AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RKMQBO

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt AGGGGAAGTCATTGTGCGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAAGTCATTGTGCGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

51 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-30*01 HUMAN IGH HUSA IMGT HUMAN-VAATMPAQ3
IGHV3-30*03 HUMAN IGH HUSA IMGT HUMAN-V3H77HARB
IGHV3-30*18 HUMAN IGH HUSA IMGT HUMAN-VFXTVMTFE
IGHV3-30-3*01 HUMAN IGH HUSA IMGT HUMAN-VGCTDGD2I
IGHV3-30*04 HUMAN IGH HUSA IMGT HUMAN-VBRMFRSVV
IGHV3-30*02 HUMAN IGH HUSA IMGT HUMAN-V5DFAA5SH
IGHV3-53*01 HUMAN IGH HUSA IMGT HUMAN-VX7PDJRMF
IGHV3-53*04 HUMAN IGH HUSA IMGT HUMAN-VAWPWFEAU
IGHV3-53*06 HUMAN IGH HUSA IMGT HUMAN-VYAXAGCZ2
IGHV3-30-5*04 HUMAN IGH IMGT HUMAN-VS6WT25VU
IGHV3-4JW6*04 HUMAN IGH HUSA HUMAN-VR262QWPH
IGHV3-30*03_S9059 HUMAN IGH HUSA HUMAN-VWEHDI3NM
IGHV3-30*04_S0935 HUMAN IGH HUSA HUMAN-VDM54O2DI
IGHV3-4JW6*07 HUMAN IGH HUSA HUMAN-VCMJ5DKYG
IGHV3-30*07 HUMAN IGH HUSA HUMAN-V7ZSW2VOL
IGHV3-30-5*03_S8990 HUMAN IGH HUSA HUMAN-V563MKOEE
IGHV3-4JW6*12 HUMAN IGH HUSA HUMAN-VXMNJNPRH
IGHV3-30*18_S0853 HUMAN IGH HUSA HUMAN-VNXUNZN4T
IGHV3-30*18_S0848 HUMAN IGH HUSA HUMAN-V2PVOKMZO
IGHV3-33*05_S6336 HUMAN IGH HUSA HUMAN-VVNFD4ZMT
IGHV3-30*18_S6076 HUMAN IGH HUSA HUMAN-VUF3V6BSO
IGHV3-4JW6*17 HUMAN IGH HUSA HUMAN-VJF4TAJBT
IGHV3-4JW6*18 HUMAN IGH HUSA HUMAN-V3LKCGLF3
IGHV3-30*18_S3563 HUMAN IGH HUSA HUMAN-VUXGUXST4
IGHV3-4JW6*20 HUMAN IGH HUSA HUMAN-VQ4DAADXX
IGHV3-30*18_S2902 HUMAN IGH HUSA HUMAN-VUCB2HRFE
IGHV3-30*18_S8081 HUMAN IGH HUSA HUMAN-VSJFWB35Q
IGHV3-30*18_S5515 HUMAN IGH HUSA HUMAN-VIB2K7AM3
IGHV3-30*02_S7840 HUMAN IGH HUSA HUMAN-VXTE6N3R2
IGHV3-30*02_S4989 HUMAN IGH HUSA HUMAN-VGXL2763N
IGHV3-33*06_S3955 HUMAN IGH HUSA HUMAN-VR3SCTLBN
IGHV3-30*02_S9143 HUMAN IGH HUSA HUMAN-VMPTGKT6M
IGHV3-33*06 HUMAN IGH HUSA HUMAN-VEDUIIPZ5
IGHV3-4JW6*32 HUMAN IGH HUSA HUMAN-VKAZSN6JS
IGHV3-33*06_S8549 HUMAN IGH HUSA HUMAN-VD4UZ6EC5
IGHV3-33*06_S4364 HUMAN IGH HUSA HUMAN-VLGIBQMNU
IGHV3-33*01 HUMAN IGH HUSA HUMAN-VEPWHHUPN
IGHV3-66*03_S8651 HUMAN IGH HUSA HUMAN-V2NXD3LTH
IGHV3-66*03_S8823 HUMAN IGH HUSA HUMAN-V4ER5BEBF
IGHV3-53*06_S2618 HUMAN IGH HUSA HUMAN-VC7WC4EG6
IGHV3-CVJX*05 HUMAN IGH HUSA HUMAN-VXRY4L22P
IGHV3-53*01_S0699 HUMAN IGH HUSA HUMAN-V35KBVGZS
IGHV3-53*01_S3995 HUMAN IGH HUSA HUMAN-VSO6ODWCJ
IGHV3-CVJX*08 HUMAN IGH HUSA HUMAN-VDZNRQOSN
IGHV3-53*02 HUMAN IGH HUSA HUMAN-VQUHUQVN3
IGHV3-66*01_S1222 HUMAN IGH HUSA HUMAN-VJNDBISH2
IGHV3-53*04_S2379 HUMAN IGH HUSA HUMAN-VGAVGYZHV
IGHV3-53*04_S2188 HUMAN IGH HUSA HUMAN-VFUS2CHML
IGHV3-CVJX*27 HUMAN IGH HUSA HUMAN-VWB6ZRDHX
IGHV3-53*04_S4544 HUMAN IGH HUSA HUMAN-VTVQWV6T4
IGHV3-66*03 HUMAN IGH HUSA HUMAN-VL7GM2HB5