AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RKMQBO

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGGGGAAGTCATTGTGCGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAAGTCATTGTGCGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

10 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-30*01 HUMAN IGH IMGT HUMAN-VAATMPAQ3
IGHV3-30*03 HUMAN IGH IMGT HUMAN-V3H77HARB
IGHV3-30*18 HUMAN IGH IMGT HUMAN-VFXTVMTFE
IGHV3-30-3*01 HUMAN IGH IMGT HUMAN-VGCTDGD2I
IGHV3-30*04 HUMAN IGH IMGT HUMAN-VBRMFRSVV
IGHV3-30*02 HUMAN IGH IMGT HUMAN-V5DFAA5SH
IGHV3-53*01 HUMAN IGH IMGT HUMAN-VX7PDJRMF
IGHV3-53*04 HUMAN IGH IMGT HUMAN-VAWPWFEAU
IGHV3-53*06 HUMAN IGH IMGT HUMAN-VYAXAGCZ2
IGHV3-30-5*04 HUMAN IGH IMGT HUMAN-VS6WT25VU