AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RNTBEN

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt TGAAAACCCACATCCTGAGAGTG spacer · 23 nt TCAGAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGTGAAAACCCACATCCTGAGAGTGTCAGAAACC

Find similar RSS

Alleles with this RSS variant

12 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-3*01 HUMAN IGH IMGT HUMAN-V6VZTO4T6
IGHV1-3*02 HUMAN IGH IMGT HUMAN-VWWWWJKNC
IGHV1-3*03 HUMAN IGH IMGT HUMAN-VQD7NRQ47
IGHV1-3*05 HUMAN IGH IMGT HUMAN-V3IZFH5K2
IGHV1-69*01 HUMAN IGH IMGT HUMAN-VQLNRZF6P
IGHV1-69*02 HUMAN IGH IMGT HUMAN-VBSLUZ7BO
IGHV1-69*04 HUMAN IGH IMGT HUMAN-V6MTV53YS
IGHV1-69*05 HUMAN IGH IMGT HUMAN-VAHBHENLN
IGHV1-69*06 HUMAN IGH IMGT HUMAN-VYKHIDXFM
IGHV1-69*09 HUMAN IGH IMGT HUMAN-VXPCV44TJ
IGHV1-69*12 HUMAN IGH IMGT HUMAN-V6F35735R
IGHV1-69*14 HUMAN IGH IMGT HUMAN-V3CHBGVBW