AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RNTBEN

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt TGAAAACCCACATCCTGAGAGTG spacer · 23 nt TCAGAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGTGAAAACCCACATCCTGAGAGTGTCAGAAACC

Find similar RSS

Alleles with this RSS variant

77 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-3*01 HUMAN IGH HUSA IMGT HUMAN-V6VZTO4T6
IGHV1-3*02 HUMAN IGH HUSA IMGT HUMAN-VWWWWJKNC
IGHV1-3*03 HUMAN IGH HUSA IMGT HUMAN-VQD7NRQ47
IGHV1-3*05 HUMAN IGH HUSA IMGT HUMAN-V3IZFH5K2
IGHV1-69*01 HUMAN IGH HUSA IMGT HUMAN-VQLNRZF6P
IGHV1-69*02 HUMAN IGH HUSA IMGT HUMAN-VBSLUZ7BO
IGHV1-69*04 HUMAN IGH HUSA IMGT HUMAN-V6MTV53YS
IGHV1-69*05 HUMAN IGH HUSA IMGT HUMAN-VAHBHENLN
IGHV1-69*06 HUMAN IGH HUSA IMGT HUMAN-VYKHIDXFM
IGHV1-69*09 HUMAN IGH HUSA IMGT HUMAN-VXPCV44TJ
IGHV1-69*12 HUMAN IGH HUSA IMGT HUMAN-V6F35735R
IGHV1-69*14 HUMAN IGH HUSA IMGT HUMAN-V3CHBGVBW
IGHV1-5HTI*02 HUMAN IGH HUSA HUMAN-VYPENFXW6
IGHV1-5HTI*03 HUMAN IGH HUSA HUMAN-VOHKFPUWT
IGHV1-69*13 HUMAN IGH HUSA HUMAN-VS325J25N
IGHV1-69*15_S4396 HUMAN IGH HUSA HUMAN-VM3M4WGM2
IGHV1-5HTI*06 HUMAN IGH HUSA HUMAN-VGVCZ6Y2Z
IGHV1-69*13_S0016 HUMAN IGH HUSA HUMAN-V4DF6ROXV
IGHV1-69*20 HUMAN IGH HUSA HUMAN-VLZGL5DSB
IGHV1-69*04_S1700 HUMAN IGH HUSA HUMAN-VMZHBXOX3
IGHV1-69*14_S5279 HUMAN IGH HUSA HUMAN-VL3F4RI77
IGHV1-69*08_S8269 HUMAN IGH HUSA HUMAN-VIOOYOS5F
IGHV1-5HTI*15 HUMAN IGH HUSA HUMAN-VW6SOZ6ZZ
IGHV1-69*10 HUMAN IGH HUSA HUMAN-V2PH3YJMP
IGHV1-69*10_S6227 HUMAN IGH HUSA HUMAN-V2BYK5ZT4
IGHV1-5HTI*18 HUMAN IGH HUSA HUMAN-VZEX54TO2
IGHV1-69*10_S8847 HUMAN IGH HUSA HUMAN-VMV6YIVAB
IGHV1-69*10_S0168 HUMAN IGH HUSA HUMAN-VNXRUDV7K
IGHV1-5HTI*22 HUMAN IGH HUSA HUMAN-VG2GYVTOI
IGHV1-69*04_S4205 HUMAN IGH HUSA HUMAN-VNVZ5IQC6
IGHV1-69*04_S7754 HUMAN IGH HUSA HUMAN-V25L6ZO5T
IGHV1-69*04_S5190 HUMAN IGH HUSA HUMAN-V4BJICTQ7
IGHV1-69*10_S9096 HUMAN IGH HUSA HUMAN-VWG74KLRW
IGHV1-5HTI*27 HUMAN IGH HUSA HUMAN-VG7RZJKQK
IGHV1-69*04_S9634 HUMAN IGH HUSA HUMAN-V45ZVFGJU
IGHV1-69*15 HUMAN IGH HUSA HUMAN-VZIB6PD3K
IGHV1-5HTI*32 HUMAN IGH HUSA HUMAN-VIEG7CHLB
IGHV1-69*12_S4770 HUMAN IGH HUSA HUMAN-V4V5ZHK25
IGHV1-5HTI*34 HUMAN IGH HUSA HUMAN-VIA467ZGX
IGHV1-69*12_S1745 HUMAN IGH HUSA HUMAN-VZ26H4DNU
IGHV1-69*12_S8688 HUMAN IGH HUSA HUMAN-VJDISITDR
IGHV1-5HTI*38 HUMAN IGH HUSA HUMAN-VUBE7AAUL
IGHV1-69*01_S6671 HUMAN IGH HUSA HUMAN-VCPGKBCF5
IGHV1-5HTI*40 HUMAN IGH HUSA HUMAN-VS2AKOUPS
IGHV1-5HTI*41 HUMAN IGH HUSA HUMAN-VRQ27M3CU
IGHV1-5HTI*42 HUMAN IGH HUSA HUMAN-VP6OXMC5K
IGHV1-5HTI*43 HUMAN IGH HUSA HUMAN-VRJMEXWAV
IGHV1-69*02_S6402 HUMAN IGH HUSA HUMAN-VBD5YBV6H
IGHV1-5HTI*45 HUMAN IGH HUSA HUMAN-VEFPREMKQ
IGHV1-69*14_S4573 HUMAN IGH HUSA HUMAN-VAJMDF7DW
IGHV1-5HTI*47 HUMAN IGH HUSA HUMAN-VKE5CKRFK
IGHV1-5HTI*48 HUMAN IGH HUSA HUMAN-VXXS6BOFK
IGHV1-69*12_S5472 HUMAN IGH HUSA HUMAN-V5YAYWY3W
IGHV1-69*15_S1378 HUMAN IGH HUSA HUMAN-V5EWKT3NY
IGHV1-5HTI*51 HUMAN IGH HUSA HUMAN-VPJ4DJBB7
IGHV1-5HTI*52 HUMAN IGH HUSA HUMAN-VOTYBMU4J
IGHV1-69*13_S7425 HUMAN IGH HUSA HUMAN-VRKYYLXY2
IGHV1-69*04_S8656 HUMAN IGH HUSA HUMAN-V2AUX7FTW
IGHV1-5HTI*55 HUMAN IGH HUSA HUMAN-VPQFYQFST
IGHV1-5HTI*58 HUMAN IGH HUSA HUMAN-VLX4PQZRB
IGHV1-69*18 HUMAN IGH HUSA HUMAN-VFQ6VRLZF
IGHV1-69*17 HUMAN IGH HUSA HUMAN-VTZP6UZBY
IGHV1-5HTI*62 HUMAN IGH HUSA HUMAN-VABQQIRSG
IGHV1-69*16_S9861 HUMAN IGH HUSA HUMAN-VFJ6XIMPR
IGHV1-5HTI*64 HUMAN IGH HUSA HUMAN-VS2ZUOHDU
IGHV1-69*13_S9835 HUMAN IGH HUSA HUMAN-VVIDRDGGE
IGHV1-69*04_S4726 HUMAN IGH HUSA HUMAN-VOI3M6I66
IGHV1-5HTI*67 HUMAN IGH HUSA HUMAN-VHOKCP5NM
IGHV1-24*01_S1381 HUMAN IGH HUSA HUMAN-VYRXEGNCC
IGHV1-3*04 HUMAN IGH HUSA HUMAN-VMHOTNTCZ
IGHV1-3*03_S4882 HUMAN IGH HUSA HUMAN-VFPD6MFEC
IGHV1-3*01_S9241 HUMAN IGH HUSA HUMAN-VYE5RA3IB
IGHV1-3*01_S3542 HUMAN IGH HUSA HUMAN-VUJMITTEJ
IGHV1-18*01 HUMAN IGH HUSA HUMAN-VGRODEYPM
IGHV1-69-2*01 HUMAN IGH HUSA HUMAN-VQXYGBDIL
IGHV1-69-2*01_S4696 HUMAN IGH HUSA HUMAN-VJSKSLBN4
IGHV1-69-2*01_S8129 HUMAN IGH HUSA HUMAN-VEYYTYHEC