AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RP6NFN

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt TGAAAACCCACATCCTGAGGGTG spacer · 23 nt TCAGAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGTGAAAACCCACATCCTGAGGGTGTCAGAAACC

Find similar RSS

Alleles with this RSS variant

8 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-2*01 HUMAN IGH IMGT HUMAN-VPDYSK4ST
IGHV1-2*02 HUMAN IGH IMGT HUMAN-V4ZQZGA5J
IGHV1-2*03 HUMAN IGH IMGT HUMAN-VVMZY6BIR
IGHV1-2*04 HUMAN IGH IMGT HUMAN-VOOT5ZFDD
IGHV1-2*06 HUMAN IGH IMGT HUMAN-VLTYQZPW7
IGHV1-2*07 HUMAN IGH IMGT HUMAN-VVQMTOQUQ
IGHV1-2*09 HUMAN IGH IMGT HUMAN-V35RLULJX
IGHV1/OR15-2*01 HUMAN IGH IMGT HUMAN-VZWK6626G