AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RP6NFN

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt TGAAAACCCACATCCTGAGGGTG spacer · 23 nt TCAGAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGTGAAAACCCACATCCTGAGGGTGTCAGAAACC

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Alleles with this RSS variant

10 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-2*01 HUMAN IGH IMGT HUMAN-VPDYSK4ST
IGHV1-2*02 HUMAN IGH HUSA IMGT HUMAN-V4ZQZGA5J
IGHV1-2*03 HUMAN IGH IMGT HUMAN-VVMZY6BIR
IGHV1-2*04 HUMAN IGH HUSA IMGT HUMAN-VOOT5ZFDD
IGHV1-2*06 HUMAN IGH HUSA IMGT HUMAN-VLTYQZPW7
IGHV1-2*07 HUMAN IGH IMGT HUMAN-VVQMTOQUQ
IGHV1-2*09 HUMAN IGH IMGT HUMAN-V35RLULJX
IGHV1/OR15-2*01 HUMAN IGH IMGT HUMAN-VZWK6626G
IGHV1-2*02_S4953 HUMAN IGH HUSA HUMAN-VLPSHXXPF
IGHV1-2*05 HUMAN IGH HUSA HUMAN-VEDXSKPDD