AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-RXT2LD

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGGGGAGGTGAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAGGTGAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

17 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-28*01 HUMAN IGH IMGT HUMAN-VED6I63TZ
IGHV4-28*02 HUMAN IGH IMGT HUMAN-VCQDKORCW
IGHV4-28*05 HUMAN IGH IMGT HUMAN-VDYUT4U2L
IGHV4-28*07 HUMAN IGH IMGT HUMAN-VA6XADXV3
IGHV4-31*02 HUMAN IGH IMGT HUMAN-VAADLDTKL
IGHV4-38-2*02 HUMAN IGH IMGT HUMAN-VZEIMLASE
IGHV4-38-2*01 HUMAN IGH IMGT HUMAN-VSKVAXVLG
IGHV4-39*02 HUMAN IGH IMGT HUMAN-VAY27VR7L
IGHV4-4*01 HUMAN IGH IMGT HUMAN-VUWBV3SV7
IGHV4-4*02 HUMAN IGH IMGT HUMAN-VTKI7DKPW
IGHV4-4*07 HUMAN IGH IMGT HUMAN-VUIRG6ICF
IGHV4-4*08 HUMAN IGH IMGT HUMAN-VEIH5HNTX
IGHV4-55*01 HUMAN IGH IMGT HUMAN-V5UYMBMKI
IGHV4-55*02 HUMAN IGH IMGT HUMAN-VXI2QEWWN
IGHV4-61*08 HUMAN IGH IMGT HUMAN-V4M5O6UMH
IGHV4-61*09 HUMAN IGH IMGT HUMAN-VCPWOAP7H
IGHV4-61*13 HUMAN IGH IMGT HUMAN-VERQBFKDT