AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS MOUSE-RPURGK

SpeciesMOUSE
Type3'D-RS · complete signal, 3' of D (28 nt)
Sources IMGT
CACAATG HEPTAMER 7 nt TCTTGTGTCCTT spacer · 12 nt ACAAGAAAG NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAATGTCTTGTGTCCTTACAAGAAAG

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Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHD6-11*01 MOUSE IGH IMGT MOUSE-DJEFJZXB4
IGHD5-7*01 MOUSE IGH IMGT MOUSE-DPZJCQL37
IGHD6-2-1*02 MOUSE IGH IMGT MOUSE-DTVS7WI6Q