AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS ORANGSUM-RQCVZW

SpeciesORANGSUM
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt ATTCAGACCTGCCCTACACCACA spacer · 23 nt CTGAAAATC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGATTCAGACCTGCCCTACACCACACTGAAAATC

Find similar RSS

Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
TRGV3*01 ORANGSUM TRG IMGT ORANGSUM-VSFNYZKGB
TRGV3*02 ORANGSUM TRG IMGT ORANGSUM-VGI4ZG2VR
TRGV3*03 ORANGSUM TRG IMGT ORANGSUM-VQTSY7WIE
TRGV4*01 ORANGSUM TRG IMGT ORANGSUM-VFURMRI67
TRGV5*01 ORANGSUM TRG IMGT ORANGSUM-VCHVMBX4O
TRGV5*02 ORANGSUM TRG IMGT ORANGSUM-VR4M4L5PC
TRGV5*03 ORANGSUM TRG IMGT ORANGSUM-VXZOFJ3HT