AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS PIG-RNYFN6

SpeciesPIG
TypeV-RS · complete signal, 3' of V (28 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt ATACAGCCCTTG spacer · 12 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (12 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

28 nt
CACAGTGATACAGCCCTTGACACAAACC

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Alleles with this RSS variant

6 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV2-13*02 PIG IGK IMGT PIG-VYAALIRFJ
IGKV2-5*01 PIG IGK IMGT PIG-V5DRIBTG7
IGKV2-6*01 PIG IGK IMGT PIG-VCKDPK2I6
IGKV2-6*02 PIG IGK IMGT PIG-VP3IBVZPR
IGKV2-8*01 PIG IGK IMGT PIG-VSUCXBYQJ
IGKV2-8*02 PIG IGK IMGT PIG-VLL42AZRQ