AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RSS RHESUS-R3RWQM

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (27 nt)
Sources MUSA
CACAGTG HEPTAMER 7 nt CTGTAGCCTGT spacer · 11 nt GCACAAACC NONAMER 9 nt
Heptamer Spacer (11 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

27 nt
CACAGTGCTGTAGCCTGTGCACAAACC

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGKV1-LJ3W*01_i0tttatcagtgagtgga_7atcc10_c14t_t19a_t21a_t25g_t27c_c31t_34ataa37_a39g_g43t_t44c_g49a_a50g_c51g_55catt58_c60a_a64t_c65t_t66g_68atcaa72_g77t_79gcctttg85_t87c_106catggag112_t114a_t115a_a117c_t124a_a125t_t126c_c130a_a131t_a133t_c136-_c137t_a138t_a142c_a144g_146gatt149_a151g_a152c_g153a_156tgat159_c162a_a164c_g166c_168catc171_c195t_c197a_t199g_a203c_a204c_206aaaat210_t220g_a222c_a223t_t226c_a240-_247-----------------------269_c276t_a277g_c279g_g282a_g289-_a291g_a293g_t294c_t296g_g298a_c302a_t303a_a305t_312atgc315_a317t_t319a_a323g_c324g_a325g_t327a_329ccaaat334 RHESUS IGK MUSA RHESUS-VDU4PB2BJ
IGKV1-LJ3W*01_i0tttatcagtgagtgga_7atcc10_t19a_t21a_t25g_t27c_c31t_33tataa37_a39g_g43t_t44c_g49a_a50g_c51g_55catt58_c60a_a64t_c65t_t66g_68atcaa72_g77t_79gcctttg85_t87a_106catggag112_t114a_t115a_a117c_t124a_a125t_t126c_c130a_a131t_a133t_c136-_c137t_a138t_a142c_a144g_146gatt149_a151g_a152c_g153a_156tgat159_c162a_a164c_g166c_168catc171_c195t_c197a_t199g_a203c_a204c_206aaaat210_t220g_a222c_a223t_t226c_a240-_247-----------------------269_c276t_a277g_c279g_g282a_g289-_a291g_a293g_t294c_t296g_g298a_c302a_t303a_a305t_312atgc315_a317t_t319a_a323g_c324g_a325g_t327a_329ccaaat334 RHESUS IGK MUSA RHESUS-V5MW2DXFC
IGKV1-LJ3W*01_i0tttatcagtgagtgga_7atcc10_t19a_t21a_t25g_t27c_c31t_34ataa37_a39g_g43t_t44c_g49a_a50g_c51g_55catt58_c60a_a64t_c65t_t66g_68atcaa72_g77t_79gcctttg85_t87a_106catggag112_t114a_t115a_a117c_t124a_a125t_t126c_c130a_a131t_a133t_c136-_c137t_a138t_a142c_a144g_146gatt149_a151g_a152c_g153a_156tgat159_c162a_a164c_g166c_168catc171_c195t_c197a_t199g_a203c_a204c_206aaaat210_t220g_a222c_a223t_t226c_a240-_247-----------------------269_c276t_a277g_c279g_g282a_g289-_a291g_a293g_t294c_t296g_g298a_c302a_t303a_a305t_312atgc315_a317t_t319a_a323g_c324g_a325g_t327a_329ccaaat334 RHESUS IGK MUSA RHESUS-VNJTQ6AFV
IGKV1-LJ3W*01_i0tttatcagtgagtgga_7atcc10_t19a_t21a_t25g_t27c_c31t_34ataa37_a39g_g43t_t44c_g49a_a50g_c51g_55catt58_c60a_a64t_c65t_t66g_68atcaa72_g77t_79gcctttg85_t87a_106catggag112_t114a_t115a_a117c_t124a_a125t_t126c_c130a_a131t_a133t_c136-_c137t_a138t_a142c_a144g_146gatt149_a151g_a152c_g153a_156tgat159_c162a_a164c_g166c_168catc171_c195t_c197a_t199g_a203c_a204c_206aaaat210_t220g_a222c_a223t_t226c_a240-_247-----------------------269_c276t_a277g_c279g_g282a_g289-_a291g_a293g_t294c_t296g_g298a_c302a_t303a_a305t_t306g_312atgc315_a317t_t319a_a323g_c324g_a325g_t327a_329ccaaat334 RHESUS IGK MUSA RHESUS-VATZRYXD4
IGKV1-LJ3W*01_i0tttatcagtgagtgga_7atcc10_t19a_t21a_t25g_t27c_c31t_34ataa37_a39g_g43t_t44c_g49a_a50g_c51g_55catt58_c60a_a64t_c65t_t66g_68atcaa72_g77t_79gcctttt85_t87a_106catggag112_t114a_t115a_a117c_t124a_a125t_t126c_c130a_a131t_a133t_c136-_c137t_a138t_a142c_a144g_146gatt149_a151g_a152c_g153a_156tgat159_c162a_a164c_g166c_168catc171_c195t_c197a_t199g_a203c_a204c_206aaaat210_t220g_a222c_a223t_t226c_a240-_247-----------------------269_c276t_a277g_c279g_g282a_g289-_a291g_a293g_t294c_t296g_g298a_c302a_t303a_a305t_312atgc315_a317t_t319a_a323g_c324g_a325g_t327a_329ccaaat334 RHESUS IGK MUSA RHESUS-V2HIHYZEK