AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-R5L2CV

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
TAGAGAG HEPTAMER 7 nt ATAGGAGACATCTGTGTTAGCCC spacer · 23 nt AGACAAAAA NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
TAGAGAGATAGGAGACATCTGTGTTAGCCCAGACAAAAA

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-3PEF*19_g3a_g6t_g9-_g18a_g25a_c27a_g32a_c33a_t34a_a40c_45caataat51_c54t_t56a_a60c_c61t_c63t_t64c_c66t_g68a_g70a_c71a_c75t_c86a_c87a_g104t_110ctag113_g118a_a119g_g122c_g123a_t125c_g128a_c129g_g132a_c136t_g141a_a142c_g144a_g145a_c148t_a152g_i156gc_t158g_c159a_t160a_c163g_g164t_t165g_t167g_a169g_g170t_172tcaa175_t177g_185aaat188_a190t_192ttag195_g202c_204tcca207_c209t_c210g_g211a_g213a_a214t_g216a_g220a_c222a_a225g_c230t_a232t_c236a_a240g_g243t_a245c_g247c_c248t_a250c_a251t_a254g_c259g_a263c_t264c_t267c_c268a_a275c_c276a_g278a_g286t_g292a_c296a_c300t_g311a_313--------320 RHESUS IGH MUSA RHESUS-VNZPRMQBW