RHESUS-VNZPRMQBW
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHV3-3PEF*19_g3a_g6t_g9-_g18a_g25a_c27a_g32a_c33a_t34a_a40c_45caataat51_c54t_t56a_a60c_c61t_c63t_t64c_c66t_g68a_g70a_c71a_c75t_c86a_c87a_g104t_110ctag113_g118a_a119g_g122c_g123a_t125c_g128a_c129g_g132a_c136t_g141a_a142c_g144a_g145a_c148t_a152g_i156gc_t158g_c159a_t160a_c163g_g164t_t165g_t167g_a169g_g170t_172tcaa175_t177g_185aaat188_a190t_192ttag195_g202c_204tcca207_c209t_c210g_g211a_g213a_a214t_g216a_g220a_c222a_a225g_c230t_a232t_c236a_a240g_g243t_a245c_g247c_c248t_a250c_a251t_a254g_c259g_a263c_t264c_t267c_c268a_a275c_c276a_g278a_g286t_g292a_c296a_c300t_g311a_313--------320: a Macaca mulatta IGH V allele sequence, 289 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGH / V |
| Functional i | False |
| Length | 289 nt |
| Protein UID i | RHESUS-VP-ZCXO23 (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VNZPRMQBW). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHV3-3PEF*19_g3a_g6t_g9-_g18a_g25a_c27a_g32a_c33a_t34a_a40c_45caataat51_c54t_t56a_a60c_c61t_c63t_t64c_c66t_g68a_g70a_c71a_c75t_c86a_c87a_g104t_110ctag113_g118a_a119g_g122c_g123a_t125c_g128a_c129g_g132a_c136t_g141a_a142c_g144a_g145a_c148t_a152g_i156gc_t158g_c159a_t160a_c163g_g164t_t165g_t167g_a169g_g170t_172tcaa175_t177g_185aaat188_a190t_192ttag195_g202c_204tcca207_c209t_c210g_g211a_g213a_a214t_g216a_g220a_c222a_a225g_c230t_a232t_c236a_a240g_g243t_a245c_g247c_c248t_a250c_a251t_a254g_c259g_a263c_t264c_t267c_c268a_a275c_c276a_g278a_g286t_g292a_c296a_c300t_g311a_313--------320 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | TAGAGAGATAGGAGACATCTGTGTTAGCCCAGACAAAAA | MUSA | RHESUS-R5L2CV |
| v_rs | TAGAGAGATAGGAGACATCTGTGTGAGCCCAGACAAAAA | MUSA | RHESUS-RECJLD |
| v_rs | TAGAGAGATAGGAGACATCTGTGTGAACCCAGACAAAAA | MUSA | RHESUS-RSJ2RC |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGCTACAAATGACACTCTTATCTACTGTGGGCATTGCTCTCTCCTGAGTCCTACAT | 46 + 11 nt | MUSA | RHESUS-LK7EU7 |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VNZPRMQBW/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases