AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RBXUJF

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (40 nt)
Sources MUSA
AACCATG HEPTAMER 7 nt TTTTTGTTTGTTTGTTTGTTGTTT spacer · 24 nt TCAACAGTC NONAMER 9 nt
Heptamer Spacer (24 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

40 nt
AACCATGTTTTTGTTTGTTTGTTTGTTGTTTTCAACAGTC

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-5TXH*02_i0ct_3acaca7_9taaaa13_g15t_i19g_21cacattt27_g31t_a33t_c34t_g36a_g42t_44agcaa48_51ataa54_t56a_g57t_c59t_61ggtttaaat69_t74g_c75a_77---tcct83_t85c_c86t_t89c_c90a_g101c_g107c_a110c_a113g_g119t_c127a_g128a_c129t_g139c_t149a_a157g_t159c_g160a_a164g_167cagg170_t172c_a184g_g185a_t186a_g189a_c195a_g197a_c198t_a200c_t208c_c209t_a220t_g224t_c228t_t233c_t234c_a237c_g241t_a242c_c243t_c245t_g252-_c255a_c263t_g267a_a268t_a269g_c278a_t281g_c284g_g286a_c287g_g289a_c290a_g292c_a295c_297------------------------320 RHESUS IGH MUSA RHESUS-VQKA2HSPO