AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RC5D6Z

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT MUSA
CACAGTG HEPTAMER 7 nt CTCCAGACTTATGAGGAAATGAG spacer · 23 nt ATTAGAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTCCAGACTTATGAGGAAATGAGATTAGAACC

Find similar RSS

Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV5-106*01 RHESUS IGL IMGT MUSA RHESUS-V5VWIRNEH
IGLV5-106*02 RHESUS IGL IMGT MUSA RHESUS-V5QCRYHDW
IGLV21-6YH6*03_t4c_g7t_g12t_c20t_a21g_c32a_t37c_c38a_c39t_g43a_a44g_46aatg49_51tata54_c63t_a64c_c69t_t74c_g75a_a85t_t86g_g89t_108ctgtcaca115_a119t_g122t_c136t_g139c_g140a_a145c_a146t_g152a_c165a_g177c_g198a_a200g_c201g_g206a_c207a_a213g_c222t_c228t_c230g_233-----237_g244c_248tgggc252_i254tg_c255t_t256g_g271a_c273t_g278a_g282c_g292a_t294c_g295a_g298t_t300c_t309c_g311a_a313t_a314t_g315t_t317c_g320a_g321t_t324c_g325a_a326g_g329a_t332g_334ggca337_a341t RHESUS IGL MUSA RHESUS-VPLCYABRX