RHESUS-VPLCYABRX
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV21-6YH6*03_t4c_g7t_g12t_c20t_a21g_c32a_t37c_c38a_c39t_g43a_a44g_46aatg49_51tata54_c63t_a64c_c69t_t74c_g75a_a85t_t86g_g89t_108ctgtcaca115_a119t_g122t_c136t_g139c_g140a_a145c_a146t_g152a_c165a_g177c_g198a_a200g_c201g_g206a_c207a_a213g_c222t_c228t_c230g_233-----237_g244c_248tgggc252_i254tg_c255t_t256g_g271a_c273t_g278a_g282c_g292a_t294c_g295a_g298t_t300c_t309c_g311a_a313t_a314t_g315t_t317c_g320a_g321t_t324c_g325a_a326g_g329a_t332g_334ggca337_a341t: a Macaca mulatta IGL V allele sequence, 314 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 314 nt |
| Protein UID i | RHESUS-VP-HSNRLS (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VPLCYABRX). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV21-6YH6*03_t4c_g7t_g12t_c20t_a21g_c32a_t37c_c38a_c39t_g43a_a44g_46aatg49_51tata54_c63t_a64c_c69t_t74c_g75a_a85t_t86g_g89t_108ctgtcaca115_a119t_g122t_c136t_g139c_g140a_a145c_a146t_g152a_c165a_g177c_g198a_a200g_c201g_g206a_c207a_a213g_c222t_c228t_c230g_233-----237_g244c_248tgggc252_i254tg_c255t_t256g_g271a_c273t_g278a_g282c_g292a_t294c_g295a_g298t_t300c_t309c_g311a_a313t_a314t_g315t_t317c_g320a_g321t_t324c_g325a_a326g_g329a_t332g_334ggca337_a341t | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAGTGCTCCAGACTTATGAGGAAATGAGATTAGAACC | MUSA | RHESUS-RC5D6Z |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGGCCTGGGCACCTGTTCTCCTGCTGATATTCTATCATTTCTCAGGTGTTCCCTCTCT | 48 + 11 nt | MUSA | RHESUS-LU265P |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VPLCYABRX/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases