AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RCLU37

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CAAAGTG HEPTAMER 7 nt CGGGAAAGTCATTGTGAGTCCAG spacer · 23 nt ACACAAAGC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CAAAGTGCGGGAAAGTCATTGTGAGTCCAGACACAAAGC

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-5TXH*02_i0aa_g3a_g4c_c7t_a8t_g9t_12----c16_20gcactgtt27_a33c_c43a_t45c_i46ca_g48a_g49a_c53g_t56a_g57c_c69t_78caaa81_a83t_i90aca_g101c_g107a_a110c_a113g_g117c_c120t_c127t_c133t_g150t_t159c_g160a_a164g_c165g_t167-_c170g_t171g_a173c_t174g_a184t_t186a_c195a_g197a_c198t_a200c_g207a_t208c_c209t_c211t_a215g_g224c_t234c_a237c_g241c_a242c_c245t_i249a_g252a_c255a_t259g_c261t_c264t_c265t_g267t_i268c_c271t_t272g_g273a_c278g_t279c_g280c_c284g_g286a_c287a_c288g_c290a_g292t_g297a_g298a_g301a_t304g_t306g_a308t_c309t_g311a_t312g_g313a_g315a_g317a RHESUS IGH MUSA RHESUS-VAR4UEK6Y