AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RG7XN7

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (38 nt)
Sources MUSA
CGCAGTG HEPTAMER 7 nt CTCAAGGCCATGCGGATGGAAG spacer · 22 nt ACCTGACCT NONAMER 9 nt
Heptamer Spacer (22 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

38 nt
CGCAGTGCTCAAGGCCATGCGGATGGAAGACCTGACCT

Find similar RSS

Alleles with this RSS variant

6 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV1-42NW*06_i0tctgcatctccagctagaagtcagggct_c1t_t4c_c10g_c14t_g15c_g21a_c22t_t29g_c32-_g35a_g36a_g37t_c39t_g43c_45-----a50_c57a_61ggaa64_t67a_g68c_c71g_g75c_77-------------89_t108-_t109-_a110g_t114g_t116g_a117g_a119c_t121c_g123c_c126t_c130g_a131t_g132c_t134a_c135g_c143-_g144a_g145t_c148t_c150t_t155c_c156t_c159g_a160t_c162t_a164t_t165g_c168a_t171g_a193t_a194t_t195g_197----200_c202t_c203g_c206g_a207g_g210a_g211a_t213c_t214a_t216a_g220a_a221g_c222t_g224a_a225g_t226g_t229c_g232-_c236t_a238c_t249-_g250c_t252c_c254g_c255t_c270t_a271t_a274t_c280t_t288a_a290t_g292c_g297a_c299a_t304g_a305g_t307g_i309attt_t310a_g311t_c312t_316ggac319_t321g_g322t_g333c_340gctca344 RHESUS IGL MUSA RHESUS-VX22U66UJ
IGLV1-42NW*06_i0tctgcatctccagctagaagtcagggct_c1t_t4c_c10g_c14t_g15c_g21a_c22t_t29g_c32-_g35a_g36a_g37t_c39t_g43c_45-----a50_c57a_61ggaa64_t67a_g68c_c71g_g75c_77-------------89_t108-_t109-_a110g_t114g_t116g_a117g_a119c_t121c_g123c_c126t_c130g_a131t_g132c_t134g_c135g_c143-_g144a_g145t_c148t_c150t_t155c_c156t_c159g_a160t_c162t_a164t_t165g_c168a_t171g_a193t_a194t_t195g_197----200_c202t_c203g_c206g_a207g_g210a_g211a_t213c_t214a_t216a_g220a_a221g_c222t_g224a_a225g_t226g_t229c_g232-_c236t_a238c_t249-_g250c_t252c_c254g_c255t_c270t_a271t_a274t_c280t_t288a_a290t_g292c_g297a_c299a_t304g_a305g_t307g_i309attt_t310a_g311t_c312t_316ggac319_t321g_g322t_c330t_g333c_340gctca344 RHESUS IGL MUSA RHESUS-V7MEB653G
IGLV1-42NW*06_i0tctgcatctccagctagaagtcagggct_c1t_t4c_c10g_c14t_g15c_g21a_c22t_t29g_c32-_g35a_g36a_g37t_c39t_g43c_45-----a50_c57a_61ggaa64_t67a_g68c_c71g_g75c_77-------------89_t108-_t109-_a110g_t114g_t116g_a117g_a119c_t121c_g123c_c126t_c130g_a131t_g132c_t134g_c135g_c143-_g144a_g145t_c148t_c150t_t155c_c156t_c159g_a160t_c162t_a164t_t165g_c168a_t171g_a193t_a194t_t195g_197----200_c202t_c203g_c206g_a207g_g210a_g211a_t213c_t214a_t216a_g220a_a221g_c222t_g224a_a225g_t226g_t229c_g232-_c236t_a238c_t249-_g250c_t252c_c254g_c255t_c270t_a271t_a274t_c280t_t288a_a290t_g292c_g297a_c299a_t304g_a305g_t307g_i309attt_t310a_g311t_c312t_316ggac319_t321g_g322t_g333c_340gctca344 RHESUS IGL MUSA RHESUS-VTCP2O3HB
IGLV1-42NW*06_i0ttctctgcatctccagctagaagtcagggct_c1t_t4c_c10g_c14t_g15c_g21a_c22t_t29g_c32-_g35a_g36a_g37t_c39t_g43c_45-----a50_c57a_61ggaa64_t67a_g68c_c71g_g75c_77-------------89_t108-_t109-_a110g_t114g_t116g_a117g_a119c_t121c_g123c_c126t_c130g_a131t_g132c_t134a_c135g_c143-_g144a_g145t_c148t_c150t_t155c_c156t_c159g_a160t_c162t_a164t_t165g_c168a_t171g_a193t_a194t_t195g_197----200_c202t_c203g_c206g_a207g_g210a_g211a_t213c_t214a_t216a_g220a_a221g_c222t_g224a_a225g_t226g_t229c_g232-_c236t_a238c_t249-_g250c_t252c_c254g_c255t_c270t_a271t_a274t_c280t_t288a_a290t_g292c_g297a_c299a_t304g_a305g_t307g_i309attt_t310a_g311t_c312t_316ggac319_t321g_g322t_g333c_340gctca344 RHESUS IGL MUSA RHESUS-VVLLGDJCA
IGLV1-42NW*06_i0ttctctgcatctccagctagaagtcagggct_c1t_t4c_c10g_c14t_g15c_g21a_c22t_t29g_c32-_g35a_g36a_g37t_c39t_g43c_45-----a50_c57a_61ggaa64_t67a_g68c_c71g_g75c_77-------------89_t108-_t109-_a110g_t114g_t116g_a117g_a119c_t121c_g123c_c126t_c130g_a131t_g132c_t134g_c135g_c143-_g144a_g145t_c148t_c150t_t155c_c156t_c159g_a160t_c162t_a164t_t165g_c168a_t171g_a193t_a194t_t195g_197----200_c202t_c203g_c206g_a207g_g210a_g211a_t213c_t214a_t216a_g220a_a221g_c222t_g224a_a225g_t226g_t229c_g232-_c236t_a238c_t249-_g250c_t252c_c254g_c255t_c270t_a271t_a274t_c280t_t288a_a290t_g292c_g297a_c299a_t304g_a305g_t307g_i309attt_t310a_g311t_c312t_316ggac319_t321g_g322t_g333c_340gctca344 RHESUS IGL MUSA RHESUS-VQXU43GGW
IGLV1-42NW*07_i0tctgcatctccagctagaagtcagggct_c1t_t4c_c10g_c14t_a15c_g21a_c22t_t29g_c32-_g35a_g36a_g37t_c39t_g43c_45-----49_c57a_61ggaa64_g66c_t67a_g68c_c71g_g75c_77-------------89_t108g_a110t_t111a_a113g_t114g_a117-_c118-_a119c_t121c_g123c_c126t_c130g_a131t_g132c_t134g_c135g_c143-_g144a_g145t_c148t_c150t_t155c_c156t_c159g_a160t_c162t_a164t_t165g_c168a_t171g_a193t_a194t_t195g_197----200_c202t_c203g_c206g_a207g_g209a_g210a_t213c_t214a_t216a_g220a_a221g_c222t_g224a_a225g_t226g_t229c_g232-_c236t_a238c_t249-_g250c_t252c_c254g_c255t_g268a_c270t_a271t_a274t_c280t_a286t_t288a_a290t_g292c_g297a_c299a_t304g_a305g_t307g_i309attt_t310a_g311t_c312t_316ggac319_t321g_g322t_g333c_a335g_340gctca344 RHESUS IGL MUSA RHESUS-V6ZRGSSR2