RHESUS-V6ZRGSSR2
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV1-42NW*07_i0tctgcatctccagctagaagtcagggct_c1t_t4c_c10g_c14t_a15c_g21a_c22t_t29g_c32-_g35a_g36a_g37t_c39t_g43c_45-----49_c57a_61ggaa64_g66c_t67a_g68c_c71g_g75c_77-------------89_t108g_a110t_t111a_a113g_t114g_a117-_c118-_a119c_t121c_g123c_c126t_c130g_a131t_g132c_t134g_c135g_c143-_g144a_g145t_c148t_c150t_t155c_c156t_c159g_a160t_c162t_a164t_t165g_c168a_t171g_a193t_a194t_t195g_197----200_c202t_c203g_c206g_a207g_g209a_g210a_t213c_t214a_t216a_g220a_a221g_c222t_g224a_a225g_t226g_t229c_g232-_c236t_a238c_t249-_g250c_t252c_c254g_c255t_g268a_c270t_a271t_a274t_c280t_a286t_t288a_a290t_g292c_g297a_c299a_t304g_a305g_t307g_i309attt_t310a_g311t_c312t_316ggac319_t321g_g322t_g333c_a335g_340gctca344: a Macaca mulatta IGL V allele sequence, 303 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 303 nt |
| Protein UID i | RHESUS-VP-T6R3XH (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-V6ZRGSSR2). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV1-42NW*07_i0tctgcatctccagctagaagtcagggct_c1t_t4c_c10g_c14t_a15c_g21a_c22t_t29g_c32-_g35a_g36a_g37t_c39t_g43c_45-----49_c57a_61ggaa64_g66c_t67a_g68c_c71g_g75c_77-------------89_t108g_a110t_t111a_a113g_t114g_a117-_c118-_a119c_t121c_g123c_c126t_c130g_a131t_g132c_t134g_c135g_c143-_g144a_g145t_c148t_c150t_t155c_c156t_c159g_a160t_c162t_a164t_t165g_c168a_t171g_a193t_a194t_t195g_197----200_c202t_c203g_c206g_a207g_g209a_g210a_t213c_t214a_t216a_g220a_a221g_c222t_g224a_a225g_t226g_t229c_g232-_c236t_a238c_t249-_g250c_t252c_c254g_c255t_g268a_c270t_a271t_a274t_c280t_a286t_t288a_a290t_g292c_g297a_c299a_t304g_a305g_t307g_i309attt_t310a_g311t_c312t_316ggac319_t321g_g322t_g333c_a335g_340gctca344 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CGCAGTGCTCAAGGCCATGCGGATGGAAGACCTGACCT | MUSA | RHESUS-RG7XN7 |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-V6ZRGSSR2/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases