AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RGQWWT

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
GACAGGG HEPTAMER 7 nt CTCTCTGGGTGGAGGCGTCAGGA spacer · 23 nt ATGAGAGCC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
GACAGGGCTCTCTGGGTGGAGGCGTCAGGAATGAGAGCC

Find similar RSS

Alleles with this RSS variant

3 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV2-66YQ*02_i0gg_c1g_a2g_g3c_g7a_c8t_10tgaggg15_c20a_c22t_26ggca29_c32a_t33g_t37g_t39g_c40g_c41g_g43-_g44t_c46g_a47g_t49g_g52c_c54-_c56t_c57t_61ggggg65_74ccgg77_t89g_g91a_i105c_a107c_t108c_c111g_t112g_t114a_t116g_c117g_t118a_t121a_g122t_g123c_a125t_i126ccct_a128c_c130t_a131g_c133a_a134c_i141t_a142g_c143t_145caaggtg151_a153t_a157c_g159c_a160c_t163c_a164t_t165c_a167t_g168a_g169c_c194g_i195g_a196c_c199a_c202g_c204a_c206a_a207c_g208a_g210t_c213t_t216c_a221c_t222a_c223g_c225a_t226a_228actga232_t235a_c237-_a238-_a239g_t247c_c248a_t249g_a253c_a254c_a256c_g258a_g259c_c260a_t262g_c264g_t266c_268tgtt271_c273a_g279c_c280t_c282a_a284g_g285t_g286t_g289c_a290t_g291t_293ctct296_g298t_c299a_g301t_a302g_304ggag307_313ctggt317_t319c_t321c_c323g_g326t_c327a_g329c_c330g_a332g_336cacgtcggg344 RHESUS IGL MUSA RHESUS-VEY6DH52S
IGLV2-66YQ*13_i0gg_c1g_a2g_g3c_g7a_c8t_10tgaggg15_c20a_c22t_26ggca29_c32a_t33g_t37g_t39g_c40g_c41g_g43-_g44t_c46g_a47g_t49g_g52c_c54-_c56t_c57t_61ggggg65_74ccgg77_t89g_g91a_i105c_a107c_t108c_c111a_t112g_t114a_t116g_c117g_t118a_t121a_g122t_g123c_a125t_i126ccct_a128c_c130t_a131g_c133a_a134c_i141t_a142g_c143t_145caaggtg151_a153t_a157c_g159c_a160c_162cctc165_c167t_g168a_g169c_i195g_a196c_c199a_c202g_c204a_c206a_a207c_g208a_g210t_c213t_t216c_a221c_t222a_c223g_c225a_t226a_228actga232_t235a_c237-_a238-_a239g_t247c_c248a_t249g_a253c_a254c_a256c_g258a_g259c_c260a_t262g_c264g_t266c_268tgtt271_c273a_g279c_c280t_c282a_a284g_g285t_g286t_g289c_a290t_g291t_293ctct296_g298t_c299a_g301t_a302g_304ggag307_313ctggt317_t319c_t321c_c323g_g326t_c327a_g329c_c330g_a332g_336cacgtcggg344 RHESUS IGL MUSA RHESUS-VSFO6MH4I
IGLV2-66YQ*13_i0gg_c1g_a2g_g3c_g7a_c8t_10tgaggg15_c20a_c22t_26ggca29_c32a_t33g_t37g_t39g_c40g_c41g_g43-_g44t_c46g_a47g_t49g_g52c_c54-_c56t_c57t_61ggggg65_74ccgg77_t89g_g91a_i105c_a107c_t108c_c111g_t112g_t114a_t116g_c117g_t118a_t121a_g122t_g123c_a125t_i126ccct_a128c_c130t_a131g_c133a_a134c_i141t_a142g_c143t_145caaggtg151_a153t_a157c_g159c_a160c_162cctc165_c167t_g168a_g169c_i195g_a196c_c199a_c202g_c204a_c206a_a207c_g208a_g210t_c213t_t216c_a221c_t222a_c223g_c225a_t226a_228actga232_t235a_c237-_a238-_a239g_t247c_c248a_t249g_a253c_a254c_a256c_g258a_g259c_c260a_t262g_c264g_t266c_268tgtt271_c273a_g279c_c280t_c282a_a284g_g285t_g286t_g289c_a290t_g291t_293ctct296_g298t_c299a_g301t_a302t_304ggag307_313ctggt317_t319c_t321c_c323g_g326t_c327a_g329c_c330g_a332g_336cacgtcggg344 RHESUS IGL MUSA RHESUS-VQMTPFV7M