RHESUS-VSFO6MH4I
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV2-66YQ*13_i0gg_c1g_a2g_g3c_g7a_c8t_10tgaggg15_c20a_c22t_26ggca29_c32a_t33g_t37g_t39g_c40g_c41g_g43-_g44t_c46g_a47g_t49g_g52c_c54-_c56t_c57t_61ggggg65_74ccgg77_t89g_g91a_i105c_a107c_t108c_c111a_t112g_t114a_t116g_c117g_t118a_t121a_g122t_g123c_a125t_i126ccct_a128c_c130t_a131g_c133a_a134c_i141t_a142g_c143t_145caaggtg151_a153t_a157c_g159c_a160c_162cctc165_c167t_g168a_g169c_i195g_a196c_c199a_c202g_c204a_c206a_a207c_g208a_g210t_c213t_t216c_a221c_t222a_c223g_c225a_t226a_228actga232_t235a_c237-_a238-_a239g_t247c_c248a_t249g_a253c_a254c_a256c_g258a_g259c_c260a_t262g_c264g_t266c_268tgtt271_c273a_g279c_c280t_c282a_a284g_g285t_g286t_g289c_a290t_g291t_293ctct296_g298t_c299a_g301t_a302g_304ggag307_313ctggt317_t319c_t321c_c323g_g326t_c327a_g329c_c330g_a332g_336cacgtcggg344: a Macaca mulatta IGL V allele sequence, 307 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 307 nt |
| Protein UID i | RHESUS-VP-WJJUO5 (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VSFO6MH4I). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV2-66YQ*13_i0gg_c1g_a2g_g3c_g7a_c8t_10tgaggg15_c20a_c22t_26ggca29_c32a_t33g_t37g_t39g_c40g_c41g_g43-_g44t_c46g_a47g_t49g_g52c_c54-_c56t_c57t_61ggggg65_74ccgg77_t89g_g91a_i105c_a107c_t108c_c111a_t112g_t114a_t116g_c117g_t118a_t121a_g122t_g123c_a125t_i126ccct_a128c_c130t_a131g_c133a_a134c_i141t_a142g_c143t_145caaggtg151_a153t_a157c_g159c_a160c_162cctc165_c167t_g168a_g169c_i195g_a196c_c199a_c202g_c204a_c206a_a207c_g208a_g210t_c213t_t216c_a221c_t222a_c223g_c225a_t226a_228actga232_t235a_c237-_a238-_a239g_t247c_c248a_t249g_a253c_a254c_a256c_g258a_g259c_c260a_t262g_c264g_t266c_268tgtt271_c273a_g279c_c280t_c282a_a284g_g285t_g286t_g289c_a290t_g291t_293ctct296_g298t_c299a_g301t_a302g_304ggag307_313ctggt317_t319c_t321c_c323g_g326t_c327a_g329c_c330g_a332g_336cacgtcggg344 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | GACAGGGCTCTCTGGGTGGAGGCGTCAGGAATGAGAGCC | MUSA | RHESUS-RGQWWT |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VSFO6MH4I/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases