AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RH3SD3

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CTCTATG HEPTAMER 7 nt GCTGTACATAATGTCCCAGGTGA spacer · 23 nt GCACACATC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CTCTATGGCTGTACATAATGTCCCAGGTGAGCACACATC

Find similar RSS

Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-ZJGS*01_g13a_g15t_t21c_g22a_g23c_g26a_a27g_g31a_g32a_t34c_g37a_t38g_t39a_g42a_g49a_g50a_c53t_c71t_t78c_g79a_a85g_g112t_c114a_c118a_a119g_g123a_c126t_g128a_g133t_t154g_g156a_g159a_g160a_c161t_a163g_t164a_t169-_t171a_a191g_a194t_t199c_c201t_c203t_t210a_c213g_c223a_a229t_c231g_g239a_t246c_t247a_c249t_a256t_a258g_c279t_c280t_t281g_c288t_a291g_c296t_301--------------------320 RHESUS IGH MUSA RHESUS-V5GXJWRWV
IGHV3-ZJGS*01_g13a_g15t_t21c_g22a_g23c_g26a_a27g_g31a_g32a_t34c_g37a_t38g_t39a_g42a_g49a_g50a_c53t_c71t_t78c_g79a_a85g_g112t_c114a_c118a_a119g_g123a_c126t_g128a_g133t_t154g_g156a_g159a_g160a_c161t_a163g_t164a_t169-_t171a_a191g_a194t_t199c_c201t_c213g_c223a_a229t_c231g_g239a_t247g_c249t_a256t_a258g_c279t_c280t_t281g_c288t_a291g_c296t_301--------------------320 RHESUS IGH MUSA RHESUS-V2WGVZM4N