RHESUS-V2WGVZM4N
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHV3-ZJGS*01_g13a_g15t_t21c_g22a_g23c_g26a_a27g_g31a_g32a_t34c_g37a_t38g_t39a_g42a_g49a_g50a_c53t_c71t_t78c_g79a_a85g_g112t_c114a_c118a_a119g_g123a_c126t_g128a_g133t_t154g_g156a_g159a_g160a_c161t_a163g_t164a_t169-_t171a_a191g_a194t_t199c_c201t_c213g_c223a_a229t_c231g_g239a_t247g_c249t_a256t_a258g_c279t_c280t_t281g_c288t_a291g_c296t_301--------------------320: a Macaca mulatta IGH V allele sequence, 275 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGH / V |
| Functional i | False |
| Length | 275 nt |
| Protein UID i | RHESUS-VP-YX3T46 (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-V2WGVZM4N). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHV3-ZJGS*01_g13a_g15t_t21c_g22a_g23c_g26a_a27g_g31a_g32a_t34c_g37a_t38g_t39a_g42a_g49a_g50a_c53t_c71t_t78c_g79a_a85g_g112t_c114a_c118a_a119g_g123a_c126t_g128a_g133t_t154g_g156a_g159a_g160a_c161t_a163g_t164a_t169-_t171a_a191g_a194t_t199c_c201t_c213g_c223a_a229t_c231g_g239a_t247g_c249t_a256t_a258g_c279t_c280t_t281g_c288t_a291g_c296t_301--------------------320 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CTCTATGGCTGTACATAATGTCCCAGGTGAGCACACATC | MUSA | RHESUS-RH3SD3 |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGAAAACAGGACTCTCCCTCTCCTGGTGAAAACAATTCCTGACCTATTTTCAGTGT | 46 + 11 nt | MUSA | RHESUS-LKWEQW |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-V2WGVZM4N/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases