AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RHJIXW

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CACCCTC HEPTAMER 7 nt ATGCCCCTTCCTCCCCACCCTGG spacer · 23 nt TCAAGCTCT NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACCCTCATGCCCCTTCCTCCCCACCCTGGTCAAGCTCT

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV26-D2KF*01_i0ctgtggtc_6----9_t11a_c20a_a21g_t23c_t25c_29gagag33_c38g_c40a_g43a_g48c_a49c_g52t_a55-_g56-_g57-_t62c_t66c_68tctca72_a76g_c78g_a80c_a82g_t83g_t84a_g86c_a106g_a108c_t112a_a113g_t116c_g117a_t118g_c120-_t121g_g122a_t124a_a133g_a134t_a140g_149------------------t167_g169c_t171c_a193c_g194c_c195a_g198a_g200a_207----210_t212a_c213t_t216c_g220c_g222c_c223a_t227g_g229t_t231c_g232a_c234t_c237t_t244c_c245t_a250t_254-----g259_t263c_g264c_a268t_g271c_g274-_g275-_c278g_c280t_a281g_g283a_c284g_c285t_g289c_a290t_292ctcaga297_t300g_a301g_303cagacca309_t312a_g313c_a316g_c317g_g319a_c320t_a321g_c325g_328tgcttgtgagacacagtcctgctgcctgcct358 RHESUS IGL MUSA RHESUS-VTHOW65TE