RHESUS-VTHOW65TE
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV26-D2KF*01_i0ctgtggtc_6----9_t11a_c20a_a21g_t23c_t25c_29gagag33_c38g_c40a_g43a_g48c_a49c_g52t_a55-_g56-_g57-_t62c_t66c_68tctca72_a76g_c78g_a80c_a82g_t83g_t84a_g86c_a106g_a108c_t112a_a113g_t116c_g117a_t118g_c120-_t121g_g122a_t124a_a133g_a134t_a140g_149------------------t167_g169c_t171c_a193c_g194c_c195a_g198a_g200a_207----210_t212a_c213t_t216c_g220c_g222c_c223a_t227g_g229t_t231c_g232a_c234t_c237t_t244c_c245t_a250t_254-----g259_t263c_g264c_a268t_g271c_g274-_g275-_c278g_c280t_a281g_g283a_c284g_c285t_g289c_a290t_292ctcaga297_t300g_a301g_303cagacca309_t312a_g313c_a316g_c317g_g319a_c320t_a321g_c325g_328tgcttgtgagacacagtcctgctgcctgcct358: a Macaca mulatta IGL V allele sequence, 281 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 281 nt |
| Protein UID i | RHESUS-VP-JW33LE (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VTHOW65TE). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV26-D2KF*01_i0ctgtggtc_6----9_t11a_c20a_a21g_t23c_t25c_29gagag33_c38g_c40a_g43a_g48c_a49c_g52t_a55-_g56-_g57-_t62c_t66c_68tctca72_a76g_c78g_a80c_a82g_t83g_t84a_g86c_a106g_a108c_t112a_a113g_t116c_g117a_t118g_c120-_t121g_g122a_t124a_a133g_a134t_a140g_149------------------t167_g169c_t171c_a193c_g194c_c195a_g198a_g200a_207----210_t212a_c213t_t216c_g220c_g222c_c223a_t227g_g229t_t231c_g232a_c234t_c237t_t244c_c245t_a250t_254-----g259_t263c_g264c_a268t_g271c_g274-_g275-_c278g_c280t_a281g_g283a_c284g_c285t_g289c_a290t_292ctcaga297_t300g_a301g_303cagacca309_t312a_g313c_a316g_c317g_g319a_c320t_a321g_c325g_328tgcttgtgagacacagtcctgctgcctgcct358 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACCCTCATGCCCCTTCCTCCCCACCCTGGTCAAGCTCT | MUSA | RHESUS-RHJIXW |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VTHOW65TE/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases