AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RJEJEB

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
TACAGAG HEPTAMER 7 nt AAGACGTCAGTGTGATCCCAGAC spacer · 23 nt ACAAACTTC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
TACAGAGAAGACGTCAGTGTGATCCCAGACACAAACTTC

Find similar RSS

Alleles with this RSS variant

7 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-5TXH*02_i0aa_a2c_g3a_g4c_c7-_a8t_c10t_g12t_g15t_a17-_21atttatt27_a33c_a41g_t45c_g48a_g49c_a50t_t56c_g57c_c69t_t81a_a83t_i91cag_g101c_t105c_g107c_a110c_a113g_c127t_c133t_c136t_g140t_g141c_c148g_153tccaggg159_g161c_g162a_c165g_a166g_171----174_a184-_t186a_c195a_g197a_c198t_a200c_c201t_g207c_t208c_c209t_a215t_t222c_c223t_g224c_t234c_a237c_g241t_a242c_a244g_c245t_a250g_a253t_c255t_a257g_g258a_t259a_c261t_c263t_c265t_a268c_c276t_t281c_c285-_g286-_c288a_g289a_g291t_a293c_g297a_g298a_c299a_g301t_a308c_c309t_g313-_c314-_a320g RHESUS IGH MUSA RHESUS-VCR3JISKA
IGHV4-KG56*01_i0t_c1g_a2t_g4t_g6t_9-------tg17_21atttatt27_a33c_a41g_t45c_g48a_g49c_a50t_c55g_t56c_g57c_c69t_t81a_a83t_i89cacagc_g107c_a110c_a113g_c127t_g133t_c136t_g140t_g141c_145-----149_t159c_g160a_t163g_a164g_c168-_c170g_t171g_a173c_t174a_a175c_t177a_c195a_g197a_c198t_a200c_c201t_g207c_t208c_c209t_a215c_t222c_c223t_g224c_t234c_a237c_g241t_a242c_c245t_a250g_a253t_c255t_a257g_g258a_t259a_c261t_c263t_c265t_a268c_c276t_t281c_c285-_g286-_c288a_g289a_g291t_a293c_g297a_g298a_c299a_g301t_a308c_c309t_g313-_c314-_a320g RHESUS IGH MUSA RHESUS-VBVL3YXEJ
IGHV4-KG56*01_i0t_c1g_a2t_g4t_g6t_9-------tg17_21atttatt27_a33c_a41g_t45c_g48a_g49c_a50t_c55g_t56c_g57c_c69t_t81a_a83t_i89cacagc_g107c_a110c_a113g_c127t_g133t_c136t_g140t_g141c_145-----149_t159c_g160a_t163g_a164g_c168-_c170g_t171g_a173c_t174a_a175c_t177a_c195a_g197a_c198t_a200c_c201t_g207c_t208c_c209t_a215c_t222c_c223t_g224c_t234c_a237c_g241t_a242c_c245t_a253t_c255t_a257g_g258a_t259a_c261t_c263t_c265t_a268c_c276t_t281c_c285-_g286-_c288a_g289a_g291t_a293c_g297a_g298a_c299a_g301t_a308c_c309t_g313-_c314-_a320g RHESUS IGH MUSA RHESUS-VMH3JJCIK
IGHV4-KG56*01_i0t_c1g_a2t_g4t_g6t_9-------tg17_21atttatt27_a33c_a41g_t45c_g48a_g49c_a50t_t56c_g57c_c69t_t81a_a83t_i89cacagc_g107c_a110c_a113g_c127t_g133t_c136t_g140t_g141c_c148g_153tccaggg159_g161c_g162a_c165g_a166g_171-----175_t177a_c195a_g197a_c198t_a200c_c201t_g207c_t208c_c209t_a215t_t222c_c223t_g224c_t234c_a237c_g241t_a242c_a244g_c245t_a250g_a253t_c255t_a257g_g258a_t259a_c261t_c263t_c265t_a268c_c276t_t281c_c285-_g286-_c288a_g289a_g291t_a293c_g297a_g298a_c299a_g301t_a308c_c309t_g313-_c314-_a320g RHESUS IGH MUSA RHESUS-VUY3QZRTT
IGHV4-KG56*01_i0t_c1g_a2t_g4t_g6t_9-------tg17_21atttatt27_a33c_a41g_t45c_g48a_g49c_a50t_t56c_g57c_c69t_t81a_a83t_i89cacagc_g107c_a110c_a113g_g133t_c136t_g140t_g141c_145-----149_t159c_g160a_t163g_a164g_c168-_c170g_t171g_a173c_t174a_a175c_t177a_c195a_g197a_c198t_a200c_c201t_g207a_t208c_c209t_a215c_t222c_c223t_g224c_t234c_a237c_g241t_a242c_a244g_c245t_a250g_a253t_c255t_a257g_g258a_t259a_c261t_c263t_c265t_a268c_c276t_c285-_g286-_c288a_g289a_g291t_a293c_g297a_g298a_c299a_g301t_a308c_c309t_g313-_c314-_a320g RHESUS IGH MUSA RHESUS-VF2FMSFTS
IGHV4-KG56*01_i0t_c1g_a2t_g4t_g6t_9-------tg17_21atttatt27_a33c_a41g_t45c_g48a_g49c_a50t_t56c_g57c_c69t_t81a_a83t_i89cacagc_g107c_a110c_a113g_g133t_c136t_g140t_g141c_145-----149_t159c_g160a_t163g_a164g_c168-_c170g_t171g_a173c_t174a_a175c_t177a_c195a_g197a_c198t_a200c_c201t_g207a_t208c_c209t_a215c_t222c_c223t_g224c_t234c_a237c_g241t_a242c_a244g_c245t_a250g_a253t_c255t_a257g_g258a_t259a_c261t_c263t_c265t_a268c_c276t_g280a_c285-_g286-_c288a_g289a_g291t_a293c_g297a_g298a_c299a_g301t_a308c_c309t_g313-_c314-_a320g RHESUS IGH MUSA RHESUS-VB3B56E36
IGHV4-KG56*01_i0t_c1g_a2t_g4t_g6t_9-------tg17_21atttatt27_a33c_a41g_t45c_g48a_g49c_a50t_t56c_g57c_c69t_t81a_a83t_i89cacagc_g107c_a110c_a113g_g133t_c136t_g140t_g141c_145-----149_t159c_g160a_t163g_a164g_c168-_c170g_t171g_a173c_t174a_a175c_t177a_c195a_g197a_c198t_a200c_c201t_g207c_t208c_c209t_a215c_t222c_c223t_g224c_t234c_a237c_g241t_a242c_a244g_c245t_a250g_a253t_c255t_a257g_g258a_t259a_c261t_c263t_c265t_a268c_c276t_t281c_c285-_g286-_c288a_g289a_g291t_a293c_g297a_g298a_c299a_g301t_a308c_c309t_g313-_c314-_a320g RHESUS IGH MUSA RHESUS-VIX5SD5OF