AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RP4DZI

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (38 nt)
Sources MUSA
CAGAGGG HEPTAMER 7 nt CAAGAAACATGTTTTTGGTGTG spacer · 22 nt GAACAAACA NONAMER 9 nt
Heptamer Spacer (22 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

38 nt
CAGAGGGCAAGAAACATGTTTTTGGTGTGGAACAAACA

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV9-46UO*06_i0g_g1a_a2g_t5g_c10g_13tccct17_t19a_c20a_g22c_g23t_c26-_t34c_t38g_49------------60_t62a_t64g_c66t_t67g_t69g_c71g_74ggggca79_a81g_t83g_c84t_a85c_t89g_c90a_104------t110_t116-_a118g_g119c_t121g_t125c_c127a_a131t_c134-_t135-_g139t_a142t_a143g_c148a_t149g_a150g_a152g_g153t_g157a_t159a_g160t_g164c_t165g_t167-_t168-_a170t_a171c_a172t_a176g_g178c_a182-_c183-_t186c_g187c_190---c193_a195t_a197g_t198c_t199c_c204t_206gggga210_t212g_a214g_a215g_a216c_c222g_a223t_a225t_t226c_t227c_a229c_c230g_c231a_c236g_a237g_240gccg243_a245g_t246g_t247c_i249gc_a250c_a251t_a253g_a254c_c257t_a258g_262ggtgg266_a270g_a271c_t272g_274ctgcag279_a283c_285ggtg288_g292a_294tcgt297_300aagc303_a308t_c312g_c314-_c315a_320cct322 RHESUS IGH MUSA RHESUS-VMXPEPIY2