AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RQGNJ6

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
CACAGTG HEPTAMER 7 nt AGGGGAAGACATTGTGAGTCCAG spacer · 23 nt ACACAAACA NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAAGACATTGTGAGTCCAGACACAAACA

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV4-KG56*01_i0ga_g4c_6atgat10_g12c_a14c_a17c_19--cact24_a27c_a33c_t45c_g48a_g49c_g57c_c69t_g79-_a83t_i89tacaac_c105t_g107c_a110c_a113g_g117t_c127a_g128t_130agcc133_g156a_t159c_g160a_a164g_t167-_c170g_t171g_a173c_t174a_a175t_t177a_c192t_a193g_195acaa198_a200c_g207a_t208c_c209t_a215g_g224c_t234c_c236g_a237c_g241t_a242c_g246a_g252a_c255a_c261t_c263t_t266g_g267a_a268t_c278a_t279a_g280c_c284g_g286a_c287a_c290a_g292t_g297a_g298a_g301a_t304a_a305g_a308t_c309t_g311a_g313a_g315a_g317a RHESUS IGH MUSA RHESUS-VXEHHVAKQ