RHESUS-VXEHHVAKQ
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGHV4-KG56*01_i0ga_g4c_6atgat10_g12c_a14c_a17c_19--cact24_a27c_a33c_t45c_g48a_g49c_g57c_c69t_g79-_a83t_i89tacaac_c105t_g107c_a110c_a113g_g117t_c127a_g128t_130agcc133_g156a_t159c_g160a_a164g_t167-_c170g_t171g_a173c_t174a_a175t_t177a_c192t_a193g_195acaa198_a200c_g207a_t208c_c209t_a215g_g224c_t234c_c236g_a237c_g241t_a242c_g246a_g252a_c255a_c261t_c263t_t266g_g267a_a268t_c278a_t279a_g280c_c284g_g286a_c287a_c290a_g292t_g297a_g298a_g301a_t304a_a305g_a308t_c309t_g311a_g313a_g315a_g317a: a Macaca mulatta IGH V allele sequence, 297 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGH / V |
| Functional i | False |
| Length | 297 nt |
| Protein UID i | RHESUS-VP-VN3UBG (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VXEHHVAKQ). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGHV4-KG56*01_i0ga_g4c_6atgat10_g12c_a14c_a17c_19--cact24_a27c_a33c_t45c_g48a_g49c_g57c_c69t_g79-_a83t_i89tacaac_c105t_g107c_a110c_a113g_g117t_c127a_g128t_130agcc133_g156a_t159c_g160a_a164g_t167-_c170g_t171g_a173c_t174a_a175t_t177a_c192t_a193g_195acaa198_a200c_g207a_t208c_c209t_a215g_g224c_t234c_c236g_a237c_g241t_a242c_g246a_g252a_c255a_c261t_c263t_t266g_g267a_a268t_c278a_t279a_g280c_c284g_g286a_c287a_c290a_g292t_g297a_g298a_g301a_t304a_a305g_a308t_c309t_g311a_g313a_g315a_g317a | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | CACAGTGAGGGGAAGACATTGTGAGTCCAGACACAAACA | MUSA | RHESUS-RQGNJ6 |
Leader
Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.
| Leader (exon 1 + exon 2) | Split | Source | Leader UID |
|---|---|---|---|
| ATGGAGAAGCAAGCGTGCAGCCTGCAAACAATTGTAATTTCCTACTCAGAACCTGTGCATGCT | 46 + 17 nt | MUSA | RHESUS-LMWJNG |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VXEHHVAKQ/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases