AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RTVQGF

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (37 nt)
Sources MUSA
TACTGTG HEPTAMER 7 nt CACGACACACAGTGTGGAAAC spacer · 21 nt CCACAGCCT NONAMER 9 nt
Heptamer Spacer (21 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

37 nt
TACTGTGCACGACACACAGTGTGGAAACCCACAGCCT

Find similar RSS

Alleles with this RSS variant

8 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV1-4B2U*02_c6g_a18g_c21t_g31t_a38g_c44g_g46-_c61g_c69t_g72t_g73t_c74t_c78t_t81g_a83t_t84c_c86t_t87c_t88a_t90c_c105a_a118c_t125c_a127c_a147g_g151a_t167a_t168c_c172t_c194g_g197t_g202a_c203a_a204g_c213t_c214a_g226c_c231t_c251g_t255c_a256t_t266c_g267a_c271t_g291a_307--------------320 RHESUS IGH MUSA RHESUS-V6DKBT7I6
IGHV1-4B2U*03_c6g_a18g_c21t_g31t_a38g_c43t_c44g_a49-_c61g_c69t_a72t_g73t_c74t_t81g_a83t_c86t_t88a_t90c_c105a_t112a_a113g_a118c_t125c_a127c_g128c_t146g_g151a_t167a_t168c_c172t_c194g_g197t_g202a_c203a_a204g_c213t_c214a_g226c_c231t_c251g_t255c_a256t_t266c_g267a_c271t_a275g_g291a_307--------------320 RHESUS IGH MUSA RHESUS-VMARURSHY
IGHV1-4B2U*03_c6g_a18g_c21t_g31t_a38g_c44g_a49-_c61g_c69t_a72t_g73t_c74t_t81g_a83t_c86t_t88a_t89c_t90c_c105a_t112a_a113g_a118c_t125c_a127c_t146g_g151a_t167a_t168c_c172t_c194g_g197t_g202a_c203a_a204g_c213t_c214a_g226c_c231t_c251g_t255c_a256t_t266c_g267a_c271t_a275g_g291a_307--------------320 RHESUS IGH MUSA RHESUS-V2ZDSXHZX
IGHV1-4B2U*03_c6g_a18g_c21t_g31t_a38g_c44g_a49-_c61g_c69t_a72t_g73t_c74t_t81g_a83t_c86t_t88a_t89c_t90c_c105a_t112a_a113g_a118c_t125c_a127c_t146g_g151a_t167a_t168c_c172t_c194g_g197t_g202a_c203a_a204g_g207a_c213t_c214a_g226c_c231t_c251g_t255c_a256t_t266c_g267a_c271t_a275g_g291a_307--------------320 RHESUS IGH MUSA RHESUS-VPQNMVERH
IGHV1-4B2U*03_c6g_a18g_c21t_g31t_a38g_c44g_a49-_c61g_c69t_a72t_g73t_c74t_t81g_a83t_c86t_t88a_t90c_c105a_t112a_a113g_a118c_t125c_a127c_g128c_t146g_g151a_t167a_t168c_c172t_c194g_g197t_g202a_c203a_a204g_c213t_c214a_g226c_c231t_c251g_t255c_a256t_t266c_g267a_c271t_a275g_g291a_307--------------320 RHESUS IGH MUSA RHESUS-VWCSO2BCV
IGHV1-4B2U*03_c6g_a18g_c21t_g31t_a38g_c44g_a49-_c61g_c69t_a72t_g73t_c74t_t81g_a83t_c86t_t88a_t90c_c105a_t112a_a113g_a118c_t125c_a127c_t146g_g151a_t167a_t168c_c172t_c194g_g197t_g202a_c203a_a204g_c213t_c214a_g226c_c231t_c251g_t255c_a256t_t266c_g267a_c271t_a275g_g291a_307--------------320 RHESUS IGH MUSA RHESUS-V5NZM2TDC
IGHV1-4B2U*03_c6g_a18g_c21t_g31t_a38g_c44g_a49-_c61g_c69t_a72t_g73t_c74t_t81g_a83t_c86t_t88a_t90c_c105a_t112a_a113g_a118c_t125c_a127t_t146g_g151a_t167a_t168c_c172t_c194g_g197t_g202a_c203a_a204g_c213t_c214a_g226c_c231t_c251g_t255c_a256t_t266c_g267a_c271t_a275g_g291a_307--------------320 RHESUS IGH MUSA RHESUS-V56A7F7JH
IGHV1-TCEU*02_c6g_c21t_a38g_g46-_a60g_c61g_c69t_g72t_g73t_c74t_t81g_a83t_c86t_t88a_t90c_c105a_t112a_a113g_a118c_t125c_a127c_t146g_g151a_t167a_t168c_t192c_c194g_g197t_g202a_a204g_c213t_c214a_g224c_g226c_c230a_c231t_c251a_t255c_a265g_t266c_c271t_307--------------320 RHESUS IGH MUSA RHESUS-V5UCCKHIJ