RSS RHESUS-RUC232

Species	RHESUS
Type	V-RS · complete signal, 3' of V (39 nt)
Sources	MUSA

Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt

CACAGTGAGGGGAAATCATTGTGAGTTCAGAAGCAAACT

Find similar RSS

Alleles with this RSS variant

4 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele name	Species	Locus	Source of this allele–RSS link	Server UID
IGHV4-53JX*01_i0t_c1g_a2t_g4t_g6t_8-------tc16_g18t_20gccct24_c26t_a27t_a33g_g36t_t45c_g48a_g49c_g57c_c65t_t72c_80catt83_i89cacaac_c105t_g107c_t109c_a110t_a113g_g119t_g128a_c129t_c136g_g145a_g146a_t149c_g153c_t159c_g160a_a163t_a164g_t165c_t167c_t168a_a170c_g172c_g173a_a175g_t177g_a184g_t185g_t186a_c188t_g190c_g191a_c194a_196ctaac200_a202c_c205t_c209-_c211a_t212a_c213g_a215g_g224c_t227g_t234c_a237c_g241t_a242c_g246a_i247g_c249a_g252a_t255a_c261t_c263t_g267a_a268c_c278a_t279c_g280c_c284a_g286a_c287a_c290a_g292t_296----299_g301a_g303t_t304a_t307a_i310a_g311c_t312a_g315c_g317t_a318t_321tttttataaaataaaa336	RHESUS	IGH	MUSA	RHESUS-VTCCK572O
IGHV4-53JX*07_i0t_c1g_a2t_c4t_g6t_8-------tc16_g18t_20gccct24_c26t_a27t_a33g_g36t_t45c_g48a_g49c_g57c_c65t_c69t_80catt83_i89cacaac_c105t_g107c_t109c_a110c_a113g_g119t_g128a_c129t_c136g_g145a_g146a_t149c_g153c_t159c_g160a_a163t_a164g_t165c_t167c_t168a_a170c_g172c_g173a_a175g_t177g_a184g_t185g_t186a_c188t_g190c_g191a_c194a_196ctaac200_a202c_c205t_c209-_c211a_t212a_c213g_a215g_g224c_t227g_t234c_a237c_g241t_a242c_g246a_i247g_c249a_g252a_t255a_c261t_c263t_g267a_a268c_c278a_t279c_g280c_c284a_g286a_c287a_c290a_g292t_297attaa301_g303-_t304a_t306g_t310-_g311-_t312a_g315c_g317t_a318t_321tttttataaaataaaa336	RHESUS	IGH	MUSA	RHESUS-VYFZ5YUT2
IGHV4-5TXH*02_i0ga_g3a_g4c_7--tg10_12ttctc16_g18t_20gccct24_c26t_a27t_a33g_g36t_t45c_g48a_g49c_g57c_c65t_c69t_g80c_t81a_a83t_i90aca_g101c_g107c_t109c_a110c_a113g_g119t_g128a_c129t_c136g_g145a_g146a_t149c_g150a_g153c_t159c_g160a_a164g_t167c_c168a_a169g_t172c_i174g_t186g_g188a_a190t_c195a_g197c_a200-_c201-_g207a_t208c_c209t_i215gag_g224c_t227g_t234c_a237c_g239a_g241t_a242c_g246a_i247g_c249a_g252a_c255a_c261t_c263t_g267a_a268c_c278a_t279c_g280c_c284a_g286a_c287a_c290a_g292t_297attaa301_g303-_t304a_t306g_t310a_312ccatta317_319tttttataaaataaaa334	RHESUS	IGH	MUSA	RHESUS-VHUOVPSTC
IGHV4-5TXH*02_i0ga_g3a_g4c_7--tg10_12ttctc16_g18t_20gccct24_c26t_a27t_a33g_g36t_t45c_g48a_g49c_g57c_c65t_c69t_t72c_g80c_t81a_a83t_i90aca_g101c_g107c_t109c_a110t_a113g_g119t_g128a_c129t_c136g_g145a_g146a_t149c_g153c_t159c_g160a_a164g_t167c_c168a_a169g_t172c_i174g_t186g_g188a_a190t_c195a_g197c_a200-_c201-_g207a_t208c_c209t_i215gag_g224c_t227g_t234c_a237c_g239a_g241t_a242c_g246a_i247g_c249a_g252a_c255a_c261t_c263t_g267a_a268c_c278a_t279c_g280c_c284a_g286a_c287a_c290a_g292t_297attaa301_g303-_t304a_t306c_t310a_312ccatta317_319tttttataaaataaaa334	RHESUS	IGH	MUSA	RHESUS-V5ZPGAATY