AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RWGXLF

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources MUSA
GACAGAG HEPTAMER 7 nt GTGCCTCTGTTACAAGGGGAGGG spacer · 23 nt CCAGGAACA NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
GACAGAGGTGCCTCTGTTACAAGGGGAGGGCCAGGAACA

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Alleles with this RSS variant

1 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV17-FZVN*01_i0gaaagtctccatcacttctttacgccaagcctgggaaaacgc_a2t_t4a_c9a_c10g_t11a_a13c_c14t_c16g_29-----33_a35t_c38t_t39c_42gtag45_g48c_t49g_c51g_g52c_c54g_a55g_a61t_t62g_64-----68_a70c_c71t_g73t_a75g_a76g_c77t_83ccctgg88_t90c_g91a_t93c_g103t_g104c_t105c_a107g_t108g_c111t_t114c_g115t_t118a_t121c_g122t_t124g_c126t_c127g_g129a_c130g_g132a_c133g_c135g_c136a_g139a_g140t_a142c_144tttt147_c149a_c150g_a151t_c154g_t155a_c156a_160tgacg164_g166c_g168t_g169c_t170c_g200c_g206a_c210t_t211c_214---------222_226-----------------242_246------251_a254g_c257t_g258c_g259t_263gggctc268_a271g_t272c_g278c_g279a_c280g_t294g_g295a_g297-_g298-_c299a_g301t_303gaga306_a308g_t310g_c312g_g313a_g314a_320tagacagg327 RHESUS IGL MUSA RHESUS-VICJTFQVS