RHESUS-VICJTFQVS
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
IGLV17-FZVN*01_i0gaaagtctccatcacttctttacgccaagcctgggaaaacgc_a2t_t4a_c9a_c10g_t11a_a13c_c14t_c16g_29-----33_a35t_c38t_t39c_42gtag45_g48c_t49g_c51g_g52c_c54g_a55g_a61t_t62g_64-----68_a70c_c71t_g73t_a75g_a76g_c77t_83ccctgg88_t90c_g91a_t93c_g103t_g104c_t105c_a107g_t108g_c111t_t114c_g115t_t118a_t121c_g122t_t124g_c126t_c127g_g129a_c130g_g132a_c133g_c135g_c136a_g139a_g140t_a142c_144tttt147_c149a_c150g_a151t_c154g_t155a_c156a_160tgacg164_g166c_g168t_g169c_t170c_g200c_g206a_c210t_t211c_214---------222_226-----------------242_246------251_a254g_c257t_g258c_g259t_263gggctc268_a271g_t272c_g278c_g279a_c280g_t294g_g295a_g297-_g298-_c299a_g301t_303gaga306_a308g_t310g_c312g_g313a_g314a_320tagacagg327: a Macaca mulatta IGL V allele sequence, 283 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
| Species | Macaca mulatta (NCBITAXON:9544) |
|---|---|
| Locus / type | IGL / V |
| Functional i | False |
| Length | 283 nt |
| Protein UID i | RHESUS-VP-HIFA3V (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: stable — no former names, re-cuts, or archival on record.
Allele names i
Every name below denotes this exact sequence (RHESUS-VICJTFQVS). None is canonical; they are labels, and the UID is the key.
| Name | Scheme | Source(s) |
|---|---|---|
| IGLV17-FZVN*01_i0gaaagtctccatcacttctttacgccaagcctgggaaaacgc_a2t_t4a_c9a_c10g_t11a_a13c_c14t_c16g_29-----33_a35t_c38t_t39c_42gtag45_g48c_t49g_c51g_g52c_c54g_a55g_a61t_t62g_64-----68_a70c_c71t_g73t_a75g_a76g_c77t_83ccctgg88_t90c_g91a_t93c_g103t_g104c_t105c_a107g_t108g_c111t_t114c_g115t_t118a_t121c_g122t_t124g_c126t_c127g_g129a_c130g_g132a_c133g_c135g_c136a_g139a_g140t_a142c_144tttt147_c149a_c150g_a151t_c154g_t155a_c156a_160tgacg164_g166c_g168t_g169c_t170c_g200c_g206a_c210t_t211c_214---------222_226-----------------242_246------251_a254g_c257t_g258c_g259t_263gggctc268_a271g_t272c_g278c_g279a_c280g_t294g_g295a_g297-_g298-_c299a_g301t_303gaga306_a308g_t310g_c312g_g313a_g314a_320tagacagg327 | VDJbase | MUSA |
Contributed by MUSA. See Sources & citations for each source's version, citation and licence.
RSS i
Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.
| Part | Sequence | Source | RSS UID |
|---|---|---|---|
| v_rs | GACAGAGGTGCCTCTGTTACAAGGGGAGGGCCAGGAACA | MUSA | RHESUS-RWGXLF |
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/RHESUS-VICJTFQVS/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases