AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

← back to search

RSS RHESUS-RYJF47

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT MUSA
TCCAATG HEPTAMER 7 nt AGGAAAAGTCAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
TCCAATGAGGAAAAGTCAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

10 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-24*01 RHESUS IGH IMGT RHESUS-VQAXUKP6B
IGHV3-24*02 RHESUS IGH IMGT RHESUS-V62A33L67
IGHV3-24*03 RHESUS IGH IMGT MUSA RHESUS-VGBKNV2RB
IGHV3-24*04 RHESUS IGH IMGT RHESUS-VTF3YH3KJ
IGHV3-50*01 RHESUS IGH IMGT RHESUS-VNGZM3O6I
IGHV3-50*02 RHESUS IGH IMGT RHESUS-VDCPAEV6C
IGHV3-50*03 RHESUS IGH IMGT RHESUS-VTH7RMEHG
IGHV3-50*04 RHESUS IGH IMGT RHESUS-VEX6LTH5A
IGHV3-50*05 RHESUS IGH IMGT RHESUS-VQNHBGQJX
IGHV3-6HY2*01_a2g_5gaggct10_t14c_g15a_g16c_g18t_t19c_a27t_g31c_g32c_t35g_g36a_t38a_c40t_a41c_g42t_g46-_g48t_c55t_t56c_g57a_c75t_t83c_c111t_t112g_g114c_t118c_a119g_g122a_c126g_g132a_g147a_c148t_g153a_t158g_g164-_t165-_g170a_a172c_g173c_g175a_a176c_g186t_a187g_t189a_a190g_a196t_g197a_g202c_g216a_g243a_g247a_g273a_g284a_g289a_a291c_g303c_t310a_a317g RHESUS IGH MUSA RHESUS-VAXOPOBAW