AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RZRMY7

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (40 nt)
Sources MUSA
CGCCATG HEPTAMER 7 nt TAAGGCTGTACATAGGGTTTGAAG spacer · 24 nt TGAGGAAAC NONAMER 9 nt
Heptamer Spacer (24 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

40 nt
CGCCATGTAAGGCTGTACATAGGGTTTGAAGTGAGGAAAC

Find similar RSS

Alleles with this RSS variant

2 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-PJYR*01_c1g_g13a_g15t_21caca24_g26a_a27g_g32a_g34c_g37a_t38g_c39a_g42a_g50a_c53t_c71t_t78c_g79a_a85g_t89g_a110t_t111c_g112t_c114a_c118a_a119g_g123a_c126t_g128a_g133t_c141g_g155a_g156a_g159a_g160a_c161t_t164g_t169a_c170a_a190c_t192c_a194t_t196c_t199c_c210t_g211c_c223a_g239a_t247g_c249t_a256t_c279t_t281a_296t------------------------320 RHESUS IGH MUSA RHESUS-VCSD2XIEO
IGHV3-PJYR*01_c1g_g13a_t14c_g15t_21caca24_g26a_a27g_g32a_g34c_g37a_t38g_c39a_g42a_g50a_c53t_g68a_c71t_t78c_g79a_a85g_t89g_a110t_t111c_g112t_c114a_g117t_c118a_a119g_t121c_g123a_c126t_g128a_g133t_c141g_g155a_g156a_g159a_g160a_c161t_t164g_t169a_c170a_a190c_t192c_a194t_t196c_t199c_c210t_g211c_c223a_g239a_t247g_c249t_a256t_c279t_t281a_g284t_296t------------------------320 RHESUS IGH MUSA RHESUS-VJP65DOOF