HUMAN-VCQ4453KI

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesHomo sapiens LocusIGH TypeV FunctionalFalse Length296 nt

IGHV3/OR16-16*03: a Homo sapiens IGH V allele sequence, 296 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

Species	Homo sapiens (NCBITAXON:9606)
Locus / type	IGH / V
Functional i	False
Length	296 nt
Protein UID i	HUMAN-VP-ESXQJP (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

296 nt

GAGGTGCAGCTGGTGGAGTCTGGGGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACACTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACAGTGACATGAACTGGGTCCTCTAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCGGATATTAGTTGGAATGGCGGTAAGACGCACTATGTGGACTCCGTGAAGGGCCAATTTACCATCTCCAGAGAAATGCCAAGAACCTCCTTGTATCTTCAAATGAACAGCCTGAGAGTCGGGGACACGGCTGTGTATTACTGTGCAAGAGA

Amino-acid sequence (V-REGION)

98 aa

EVQLVESGGGLVQPGGSLRHSCAASGFTFSNSDMNWVL*APGKGLEWVSDISWNGGKTHYVDSVKGQFTISREMPRTSLYLQMNSLRVGDTAVYYCAR

Published by the source, and consistent with the nucleotide sequence above. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (HUMAN-VCQ4453KI). None is canonical; they are labels, and the UID is the key.

Name	Scheme	Source(s)
IGHV3/OR16-16*03	IMGT	IMGT

Other names & identifiers

Alternative and former names, e.g. IMGT clone names, plus accession identifiers.

Name	Kind	Source(s)
Z14220.1	NCBI accession	ncbi_nucleotide

External records i

NCBI nucleotide: link GenBank: GENBANK:Z14220 GenBank: GENBANK:Z14220.1 IMGT: IGHV3/OR16-16*03

Literature references 1 total · 1 verified i

PubMed publications linked to this allele.

PMID	Title	Evidence	Source
8419161		verified	ncbi_nucleotide

Contributed by IMGT, ncbi_nucleotide. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

Part	Sequence	Source	RSS UID
v_rs	CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACACAAACC	IMGT	HUMAN-REXGWW

Leader

Signal-peptide coding sequence (spliced exon 1 + exon 2). The genomic intron between the two exons is deferred.

Leader (exon 1 + exon 2)	Split	Source	Leader UID
ATGGAGTTTGGGCTGAGCTGGGTCTTTCTTGCTGCTATTTTAAAAGGTGTGCAGTGT	46 + 11 nt	IMGT	HUMAN-LAMAXC

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/HUMAN-VCQ4453KI/similar?min_identity=0.95&kind=nt.

API: JSON · AIRR AlleleDescription · aliases