AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-REXGWW

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT
CACAGTG HEPTAMER 7 nt AGGGGAAGTCAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

20 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-11*01 HUMAN IGH IMGT HUMAN-VXXWTVGWE
IGHV3-21*01 HUMAN IGH IMGT HUMAN-VBBDD5WKF
IGHV3-21*02 HUMAN IGH IMGT HUMAN-VQEWNVRBT
IGHV3-21*06 HUMAN IGH IMGT HUMAN-VIP4GSIL4
IGHV3-21*08 HUMAN IGH IMGT HUMAN-V7WHFVQSS
IGHV3-48*03 HUMAN IGH IMGT HUMAN-VQ7QZGYFB
IGHV3-64D*06 HUMAN IGH IMGT HUMAN-V6TBYQLF2
IGHV3-64D*08 HUMAN IGH IMGT HUMAN-VPUWOHKSP
IGHV3-64D*09 HUMAN IGH IMGT HUMAN-VJOTJRUUO
IGHV3-69-1*01 HUMAN IGH IMGT HUMAN-VPITGVE2O
IGHV3-7*01 HUMAN IGH IMGT HUMAN-VJ4ROGN32
IGHV3-7*03 HUMAN IGH IMGT HUMAN-VD7VPIU4W
IGHV3-7*04 HUMAN IGH IMGT HUMAN-VNHZKUKYY
IGHV3-7*05 HUMAN IGH IMGT HUMAN-VT5TVLN23
IGHV3-71*03 HUMAN IGH IMGT HUMAN-V2A3ME4SO
IGHV3/OR16-10*01 HUMAN IGH IMGT HUMAN-VG4LN3PU7
IGHV3/OR16-16*03 HUMAN IGH IMGT HUMAN-VCQ4453KI
IGHV3/OR16-20*01 HUMAN IGH IMGT HUMAN-VPCRMJMRS
IGHV6-1*01 HUMAN IGH IMGT HUMAN-V2D6E6QRE
IGHV6-1*03 HUMAN IGH IMGT HUMAN-VBRBTMX5A