AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS HUMAN-REXGWW

SpeciesHUMAN
TypeV-RS · complete signal, 3' of V (39 nt)
Sources HUSA IMGT
CACAGTG HEPTAMER 7 nt AGGGGAAGTCAGTGTGAGCCCAG spacer · 23 nt ACACAAACC NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGAGGGGAAGTCAGTGTGAGCCCAGACACAAACC

Find similar RSS

Alleles with this RSS variant

32 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGHV3-11*01 HUMAN IGH HUSA IMGT HUMAN-VXXWTVGWE
IGHV3-21*01 HUMAN IGH HUSA IMGT HUMAN-VBBDD5WKF
IGHV3-21*02 HUMAN IGH IMGT HUMAN-VQEWNVRBT
IGHV3-21*06 HUMAN IGH IMGT HUMAN-VIP4GSIL4
IGHV3-21*08 HUMAN IGH IMGT HUMAN-V7WHFVQSS
IGHV3-48*03 HUMAN IGH HUSA IMGT HUMAN-VQ7QZGYFB
IGHV3-64D*06 HUMAN IGH HUSA IMGT HUMAN-V6TBYQLF2
IGHV3-64D*08 HUMAN IGH HUSA IMGT HUMAN-VPUWOHKSP
IGHV3-64D*09 HUMAN IGH HUSA IMGT HUMAN-VJOTJRUUO
IGHV3-69-1*01 HUMAN IGH IMGT HUMAN-VPITGVE2O
IGHV3-7*01 HUMAN IGH HUSA IMGT HUMAN-VJ4ROGN32
IGHV3-7*03 HUMAN IGH HUSA IMGT HUMAN-VD7VPIU4W
IGHV3-7*04 HUMAN IGH HUSA IMGT HUMAN-VNHZKUKYY
IGHV3-7*05 HUMAN IGH HUSA IMGT HUMAN-VT5TVLN23
IGHV3-71*03 HUMAN IGH IMGT HUMAN-V2A3ME4SO
IGHV3/OR16-10*01 HUMAN IGH IMGT HUMAN-VG4LN3PU7
IGHV3/OR16-16*03 HUMAN IGH IMGT HUMAN-VCQ4453KI
IGHV3/OR16-20*01 HUMAN IGH IMGT HUMAN-VPCRMJMRS
IGHV6-1*01 HUMAN IGH HUSA IMGT HUMAN-V2D6E6QRE
IGHV6-1*03 HUMAN IGH IMGT HUMAN-VBRBTMX5A
IGHV3-2ZME*07 HUMAN IGH HUSA HUMAN-V6GYAGT4U
IGHV3-21*01_S2942 HUMAN IGH HUSA HUMAN-VJIY57L6D
IGHV3-21*01_S3091 HUMAN IGH HUSA HUMAN-VI6F6MRTH
IGHV3-11*04 HUMAN IGH HUSA HUMAN-VRGGL3W7M
IGHV3-3H2D*02 HUMAN IGH HUSA HUMAN-V5S3AC6NC
IGHV3-11*05 HUMAN IGH HUSA HUMAN-VJKYKPCF5
IGHV3-11*05_S8423 HUMAN IGH HUSA HUMAN-VEB2VGFXS
IGHV3-11*06 HUMAN IGH HUSA HUMAN-VMYXRD4DC
IGHV3-7*01_S6506 HUMAN IGH HUSA HUMAN-VDZYIBAIP
IGHV3-7*01_S0448 HUMAN IGH HUSA HUMAN-VO3NB7GVC
IGHV3-7*03_S5452 HUMAN IGH HUSA HUMAN-VGQEZBCGE
IGHV3-64D*09_S3900 HUMAN IGH HUSA HUMAN-VVFJ2YYDC