MOUSE-VHSKAZQ6S
AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.
a Mus musculus TRA V allele sequence, 280 nt, not recorded, archived. The nucleotide and amino-acid sequence is below, with every recorded name and its source.
A newer source record exists for this allele designation. TRAV7D-2*02 is still published by IMGT as MOUSE-V7GR2VQDJ, 277 nt, whose bases differ from this one. This is the earlier record (280 nt, current in IMGT releases 2016-12-19–2022-01-17). The allele was not renamed and it was not withdrawn: IMGT changed the published sequence extent associated with this designation. Both extents are kept because a sequence is identified by its bases, so a change in extent is a different sequence.
Earlier records of this allele i
IMGT has published this allele name over more than one sequence extent. Earlier sequence extents are deferred from default search results but remain resolvable, so a paper that cited one still leads here.
| Record | Name | Length | Relation to this record | IMGT releases |
|---|---|---|---|---|
| MOUSE-VCXPDEB7T | TRAV7D-2*02 | 272 nt | contained in this record | 2013-01-20–2015-03-19 |
| Species | Mus musculus (NCBITAXON:10090) |
|---|---|
| Locus / type | TRA / V |
| Functional i | None |
| Length | 280 nt |
| Protein UID i | MOUSE-VP-B2POQ2 (shared by alleles with the same V-REGION amino-acid sequence) |
Coding sequence (nt)
Amino-acid sequence (V-REGION)
Translated here from the nucleotide sequence; no source published a protein for this allele. i
Name history i: first seen IMGT 2016-12-19; formerly TRAV7D-2*02 (to 2016-12-19); re-cut from TRAV7D-2*02 (272 nt); superseded by TRAV7D-2*02 (277 nt); archived — removed from the current IMGT reference, kept reachable;
Allele names i
None.
Former IMGT names i
| Former name | Last seen in IMGT release |
|---|---|
| TRAV7D-2*02 | 2016-12-19 |
Contributed by IMGT. See Sources & citations for each source's version, citation and licence.
Find similar (nt · aa · cross-species) i
Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.
Ranks coding alleles by normalized edit-distance identity.
Also available at /api/sequences/MOUSE-VHSKAZQ6S/similar?min_identity=0.95&kind=nt.
API: JSON · AIRR AlleleDescription · aliases