AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RHESUS-V3WIJYLCU

AIRBabel's deterministic identifier, minted from the sequence (SPECIES-CODE+hash) i: a stable sequence-derived identifier, not an official allele name. This sequence's names from each source are listed under Allele names.

SpeciesMacaca mulatta LocusIGL TypeV FunctionalFalse Length299 nt

IGLV18-63QE*06_g15t_c20t_c38g_c42a_c65t_g75a_t82a_c83a_c87t_a88g_g91a_g92c_g93a_104atac107_a113c_c118a_g120c_g132t_t135c_141-ggt144_c146t_c147g_c149t_c150t_a152g_c156g_t163c_a164t_a167g_a168t_a169g_a200g_a202g_g204t_c205t_g216a_t219c_t220c_t228c_c229t_i231t_t252c_c254a_c257t_a279g_c283t_a284g_t286c_t307c_c318t_t321g_c324t_g333a_a334g_g335a_340ta341: a Macaca mulatta IGL V allele sequence, 299 nt, non-functional. The nucleotide and amino-acid sequence is below, with every recorded name and its source.

SpeciesMacaca mulatta (NCBITAXON:9544)
Locus / typeIGL / V
Functional iFalse
Length299 nt
Protein UID iRHESUS-VP-DMLUVG (shared by alleles with the same V-REGION amino-acid sequence)

Coding sequence (nt)

299 nt
CAGTCTGTGCTGACTCAGCTGCCCTCAGTGTCTGGGGGCCCAGGGCAGAGGGTCACCATCTTCTGCACTGGAAGCAGCAACAATGTCACAGATACTTATTCTGTGAACTGGTACCAGCATCTCCCAGGGGTGTGCTTAGACTGCTCATCCTTGGTGATAGTGATTGACCCTCAGGAGTCCCTGACTGATTTCTCTGGCTCCAAGTCTGGCAACTTAGCCTCCCTGACCATCACTGGGCTCTGGCCTGAGGATGAGGCTGATTATCACTGCCAGTCTTAGGATAGCAGCCTAGATGCTTA

Amino-acid sequence (V-REGION)

99 aa
QSVLTQLPSVSGGPGQRVTIFCTGSSNNVTDTYSVNWYQHLPGVCLDCSSLVIVIDPQESLTDFSGSKSGNLASLTITGLWPEDEADYHCQS*DSSLDA

Translated here from the nucleotide sequence; no source published a protein for this allele. i

Name history i: stable — no former names, re-cuts, or archival on record.

Allele names i

Every name below denotes this exact sequence (RHESUS-V3WIJYLCU). None is canonical; they are labels, and the UID is the key.

NameSchemeSource(s)
IGLV18-63QE*06_g15t_c20t_c38g_c42a_c65t_g75a_t82a_c83a_c87t_a88g_g91a_g92c_g93a_104atac107_a113c_c118a_g120c_g132t_t135c_141-ggt144_c146t_c147g_c149t_c150t_a152g_c156g_t163c_a164t_a167g_a168t_a169g_a200g_a202g_g204t_c205t_g216a_t219c_t220c_t228c_c229t_i231t_t252c_c254a_c257t_a279g_c283t_a284g_t286c_t307c_c318t_t321g_c324t_g333a_a334g_g335a_340ta341 VDJbase MUSA

Contributed by MUSA. See Sources & citations for each source's version, citation and licence.

RSS i

Recombination signal sequences flanking this allele. Click one to see every coding allele linked to that exact RSS variant.

PartSequenceSourceRSS UID
v_rsCACAGTGCTCCGGGCCGGTGAGAAAGTGAGACAAAAACA MUSA RHESUS-RUYABU

Find similar (nt · aa · cross-species) i

Everything comparative about this sequence (the exact differences to other alleles, protein consequence, IMGT alignment, cross-species nearest) is shown per hit in the results of this query.

Ranks coding alleles by normalized edit-distance identity. Also available at /api/sequences/RHESUS-V3WIJYLCU/similar?min_identity=0.95&kind=nt.