AIRBabel immunoglobulin and T-cell receptor allele sequences · leaders · RSSs

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RSS RHESUS-RUYABU

SpeciesRHESUS
TypeV-RS · complete signal, 3' of V (39 nt)
Sources IMGT MUSA
CACAGTG HEPTAMER 7 nt CTCCGGGCCGGTGAGAAAGTGAG spacer · 23 nt ACAAAAACA NONAMER 9 nt
Heptamer Spacer (23 nt) Nonamer

RSS spacer length determines pairing under the 12/23 rule, so it follows the locus rather than the segment: a 12 nt RSS recombines with a 23 nt RSS.

39 nt
CACAGTGCTCCGGGCCGGTGAGAAAGTGAGACAAAAACA

Find similar RSS

Alleles with this RSS variant

5 coding allele(s) linked to this exact RSS. The Source column shows which source recorded each allele–RSS pairing. Source coverage of allele to RSS pairings is source-specific.

Allele nameSpeciesLocus Source of this allele–RSS linkServer UID
IGLV1-1*02 RHESUS IGL IMGT MUSA RHESUS-VSSXGQES2
IGLV1-1*01 RHESUS IGL IMGT MUSA RHESUS-VHRLBUL6S
IGLV18-63QE*06_g15t_c20t_c38g_c42a_c65t_g75a_t82a_c83a_c87t_a88g_g91a_g92c_g93a_104atac107_a113c_c118a_g120c_g132t_t135c_141-ggt144_c146t_c147g_c149t_c150t_a152g_c156g_t163c_a164t_a167g_a168t_a169g_a200g_a202g_g204t_c205t_g216a_t219c_t220c_t228c_c229t_i231t_t252c_c254a_c257t_a279g_c283t_a284g_t286c_t307c_c318t_t321g_c324t_g333a_a334g_g335a_340ta341 RHESUS IGL MUSA RHESUS-V3WIJYLCU
IGLV18-63QE*06_g15t_c20t_c38g_c42a_c65t_g75a_t82a_c83a_c87t_a88g_g91a_g92c_g93a_104atac107_t112c_a113c_c118a_g120c_g132t_t135c_141-ggt144_c146t_c147g_c149t_c150t_a152g_c156g_t163c_a164t_a167g_a168t_a169g_a200g_a202g_g204t_c205t_g216a_t219c_t220c_t228c_c229t_i231t_t252c_c254a_c257t_a279g_c283t_a284g_t286c_t307c_c318t_t321g_c324t_g333a_a334g_g335a_340ta341 RHESUS IGL MUSA RHESUS-V6J6H67VU
IGLV18-63QE*06_g7a_g15t_c20t_c38a_c42a_c65t_g75a_t82a_c83a_c87t_a88g_g91a_g92c_g93a_104atac107_t112c_a113c_c118a_g120c_g132t_t135c_141-ggt144_c146t_c147g_c149t_c150t_a152g_c156g_t163c_a164t_a167g_a168t_a169g_a200g_a202g_g204c_c205t_g216a_t219c_t220c_t228c_c229t_i231t_t252c_c254a_c257t_a279g_c283t_a284g_t286c_t307c_c318t_t321g_c324t_g333a_a334g_g335a_340ta341 RHESUS IGL MUSA RHESUS-VSBOKUVCY